 |
Information for unigene UN33680
| FASTA Sequence |
| Unigene ID: UN33680 | Length: 911 |
SSR | | CTGAACTACTTTCTTTTATATAGTCTACTTTCATCCTCTTAAGTCGGACGCTTTCTTGGTTAAGTGGGCTGAACTCAGTTATTTGA
TGGACTGTTGAATGATGATTGTAATCCATCTCTAGCATCATGACTATTTCTTTGACTATTTCTTTACTCTCTCTCACTGATCGATC
CACTTACAATAAATTATCTAATAATTAAGACCATATATTGGGCCGGTATAGCTTGTGCCTAACGGCCCATTAAGAGTCCATATCTT
ACCAACTAAACACCCCCGAAAAAAGAAAAGAACATCAAATTTAAGTCCTCAGGGAAGAGACATCAACAAAACCCAGAGGGTTCGTT
CATAAACCCTACTTTCCTCCACCTCCTCCTCCTCCTCCTCACTCGAATATCTGAGTAAAATACAATGTCTCCGAGTTAAAAACGAT
GAGGCTCATTGTATCCCCTCTCCACCTCCTCCTCAAAATGCTCTGCTCTCTTCGCAACTTCATCCACTTCAATAATCGCAGATTCC
CTCGCCACGTAACCCCTTGTTCCTCTCCCTCATCTCCTTTCCTCTGGCTCACTAGCTTCCTCTGCGTCATTCGTTACCCTTTCGTC
ACCAAAACCACCGCCCCTCCTTCATCTCCAACCGACGGAGACTGGATCCGCCACGTCGTCAAGAACGATCTATGGGAAGATCCCCA
AATCAACGATCCGATTCGCGTCCCAAAGATCCTCATCGAACTGAGAGGAGACCCTAGGTTAGCCCTCAAGTTCTTCAATTGGTCAA
CGAGGTTTAACCGCACCGTTGAATCACACTCTATCATAGCACACATTCTCTTTTGCGCTAGAATGTACCACGACGCTAATACTATC
CTTAGAGAGATGGTTATGTTAAACAGCAGCTGCGACGTCGTTTTCGATGCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178323 tetratricopeptide repeat-containing protein [Arabidopsis thaliana] | 381 | 1e-034 |
| XP_002518803 pentatricopeptide repeat-containing protein, putative [Ricinus communis] | 229 | 6e-017 |
| XP_002273398 PREDICTED: hypothetical protein [Vitis vinifera] | 160 | 6e-009 |
| AAC97219 hypothetical protein [Arabidopsis thaliana] | 146 | 2e-007 |
| ADQ43199 unknown [Eutrema parvulum] | 141 | 9e-007 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C894 Putative pentatricopeptide repeat-containing protein At2g02150 | 381 | 6e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RY36 Pentatricopeptide repeat-containing protein, putative | 229 | 4e-017 |
| C7SI28 Putative PPR repeat protein | 137 | 2e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G02150.1 pentatricopeptide (PPR) repeat-containing protein | 146 | 1e-009 |
| AT4G26680.1 pentatricopeptide (PPR) repeat-containing protein | 112 | 9e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
