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Information for unigene UN33756
FASTA Sequence |
Unigene ID: UN33756 | Length: 496 |
SSR | | CCATCGAATTGAGACCAGCACATCTATATGGACTACCCAAACCGCAGATCGGAGGATTCATCATACCATCATCATCATCATCTTCA
TAATACTCATCACCATTAGACCTCATATTAGCCAAAACTTTGAAGAAGAAGTCAACCTCTCAAGGAAGAACAATGGGCCCATCACA
TCTATATCCATATTCAGTCTCTGATTCTTCTAACAAGTTCTTGAACAAAGGATGGTTCAACAATTTCGTTTTCACCACGACCCTCT
GTTTCGTGGGACCCACGTAAACTGCGAAACACCCGTGTGGCGGAGGCGGCGGCGACTTTTTCTTGATATTTCCTGTTGATTCGTTG
TTCTCAGCATTCTCGAGATGAACAGAGCCATTCCAAGACTTGCTCTTGGTGATTATTGAAGGCGTGCTTGAAGAGCTCTTATGCCC
AAAAGACTTCATTTTGATCCATGTCTTCATCATCGGATTCTTCATTTGTTCTCTTCTTAATTATGA
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GenBank top hits (Blast detail) | Score | e value |
NP_199889 SAUR-like auxin-responsive protein [Arabidopsis thaliana] | 496 | 9e-049 |
XP_002864075 auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata] | 492 | 3e-048 |
XP_002318753 SAUR family protein [Populus trichocarpa] | 281 | 8e-024 |
XP_002514869 hypothetical protein RCOM_1078910 [Ricinus communis] | 280 | 1e-023 |
XP_002511133 calmodulin binding protein, putative [Ricinus communis] | 269 | 2e-022 |
Swiss-Prot top hits | Score | e value |
No hits found | | |
TrEMBL top hits (Blast detail) | Score | e value |
Q9LUE5 At5g50760 | 496 | 1e-048 |
B9I3W0 SAUR family protein | 281 | 9e-024 |
B9RMA0 Putative uncharacterized protein | 280 | 1e-023 |
B9RAA8 Calmodulin binding protein, putative | 269 | 2e-022 |
B9GZD1 SAUR family protein | 255 | 1e-020 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G50760.1 auxin-responsive family protein | 519 | 2e-053 |
AT5G20810.1 auxin-responsive protein, putative / small auxin up RNA (SAUR_B) | 179 | 5e-014 |
AT5G20810.2 auxin-responsive protein, putative / small auxin up RNA (SAUR_B) | 167 | 1e-012 |
AT3G43120.1 auxin-responsive protein-related | 161 | 7e-012 |
AT4G34750.1 auxin-responsive protein, putative / small auxin up RNA (SAUR_E) | 152 | 7e-011 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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