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Information for unigene UN33780

FASTA Sequence
Unigene ID: UN33780Length: 1028 SSR 
CATCAAAGTTTCTCTTCAGTTTTCAACAACACATTACAACAAGAAATAAAACAACCTAAATATGATAATTAAACGAGAAAAGAAAA
TGACTAAAAGAGATCAAGAATTTCTGAAATGGAGGTGTTGCACAGGGGACAGTTTCCTCTTTGAACCCAAAGCTCTCTCGAACACA
ACCTGCAAAACGTATGACCACACGGGATAAACGCTGCTCCTTTGCTTCTTACCATACAAACACAACAACTTATCTCCGCCGCCGCC
GCCGCCGCCGCCGTCTCATCCACCGCTCCTCTCTCCTCTTCCTCTCCGTCTCCTCCTCCTACCAAGTTCATTTGCCCTTCGTTCTC
ATCCAACAACTCCATCAACGACATCCTTGCCGGCTGCATGTCTGTCATCACCGGCGGCGTTTCCTCTTCCCTAGCTGACAAGGCTC
TCTCCTCCGCCAACACCGCTCCTAATTGTAACCTCCCCTCCGCCGTTACTCCGCCGCTGGGAGCAGACTCCGGTTGTGATTGTCCC
CCTTCGTTTCTGGAGTTGGAGAGGAGAGAACCGAGCTGGTGACTGTTACTATTGTCCCGGTTAAGGACAGGAGTATTCAAACTCGG
GATAGGATTCAACGAGATCCAAACGGTAGCATTGCGTTTGAGGCGGAGCTTTTCGCGGAGAGACTTCCAAGCGGTCTTGTCCCGGG
GGCTGTAGTCGTGTCGGTGCTCTCTCTGCATTACATCAAGAAGTGTCCGATTTGATTGGTTCCTCGAAGGCAGAGGCTGCGGCGAG
GCTCCGTTTCTGTCGGCCATTAGAATAGCTTCAAGAGTCAATCCCGGTATTGAGCTCCGGCCAGTCTCCATACAATCTAGTAACGT
CACTCTTAGCCTATCACCACCCTCCATTTGCATCATCTTTTACTAACTGAGCTTAGAGAATATGAAAGTGAACAGATGAACACTTT
GGCTTTCTTCGTTTGTAGCAGAATCCGAAATCCAAGAGCAGATCTTTGAAGTTAAACTCTTTTCTTCTCACTTTATCTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863174 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6562e-066
XP_002883568 hypothetical protein ARALYDRAFT_480010 [Arabidopsis lyrata subsp. lyrata]4833e-046
NP_189139 RING/U-box domain-containing protein [Arabidopsis thaliana]4823e-046
XP_002887045 hypothetical protein ARALYDRAFT_338867 [Arabidopsis lyrata subsp. lyrata]4375e-041
CAB45509 putative protein [Arabidopsis thaliana]3552e-031

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LJR9 At3g250304822e-046
Q9SV59 Putative uncharacterized protein AT4g131003551e-031
A8MR29 Uncharacterized protein At4g13100.33461e-030
Q3EA46 Putative uncharacterized protein At4g13100.23461e-030
A5AEU5 Putative uncharacterized protein3083e-026

Arabidopsis top hits (Blast detail)Scoree value
AT3G25030.1 zinc finger (C3HC4-type RING finger) family protein8574e-092
AT3G25030.2 zinc finger (C3HC4-type RING finger) family protein8574e-092
AT4G13100.1 zinc finger (C3HC4-type RING finger) family protein6773e-071
AT4G13100.2 zinc finger (C3HC4-type RING finger) family protein3476e-033
AT4G13100.3 zinc finger (C3HC4-type RING finger) family protein3476e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information