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Information for unigene UN33790
FASTA Sequence |
Unigene ID: UN33790 | Length: 1239 |
SSR | | GTAAAGTTTCTATTTTTGGAGATTTTGTAGTTGTCTGGAATGCTTTTCCCACTACTTGGAATTGGTGGCTTATGCAGAAAAAGGAC
GAAGCTTATTTCAAGACCCTGTTACAGGCACTTGAGACTACTCCAGGATTGTATTTTTCATATGAGACTGATCTTACTGTCAAGTA
AGTTTCGCTATCTGATTATATCGTAGTTAAACAGTGTCATTCTCTAAATGTGTGTGTGACCCTTTGACTATGAAGTTCCACATATT
TAAGAATATTATGTTTAATCCAATGTTGCAGCTTGCAAAGAAGGTGCAAGCTAGCTGTTGGTTGGACGAGTAAGCCCATGTGGAAG
CAGGTTGGTTATTCATCTCATCCTTGTGCAACTTTTGTTTTTTCTATTACTATTTTTTTGTCTGATTTTAGTTGGTAGGCTGAAGG
TTAACTTGCGTGTCAGGCTGACCCTCGATATGTTTGGAACTGGCATCTTTTGGAGGAACTGATTGAATGCAAAGTAAGTTGTCTCT
TTCTAAGTTTGATTTTTCTCATTCCATGTCAAACTTCACAGATCTAATCTTCTCTTGGTGTTGTAGCTGGATGGTTTTATTACCCC
TCTGCTTCAAGGAAATATCCTTTATTTATCTTCTGATTCGCTTCTTCTTCTTCGACTGTCTTTATATATATATATGCAATGTTGTC
TCTTTCAACGTGTTTGTTTAAAAATTAACCAACGGTTAAGCTACCAAGTTGCTGAGCTACAGCTGAAGAATTCTCCTTCCGTGATA
TCTTTAATTTCCAGGCGCTGTACACGTCGTCTAGGTGTGTTTTAGTGCTGTTGGAAAATTCAGTTAAATGCCTGTTTGATACTCAT
GTTGGAATTGCCATTCCAGGTACACGTATGTGGAGAAGAGGAGCCAATCTTGAGGGAGACACTGCTAATTTTGTGGAATCTGAACA
AATAATGGAGATTAATGGTTTCAAGTTCTCTTTACTGCAGGTATTGCTCTTCTTTTTCTCAGTTTAAAGGTTTCCTTTTATTTCTT
GTGGATTATAACCGTCTTGCTTTCACTTGCTAGGTTCGAGGTTCAATTCCACTTCTTTGGGAGCAAATCGTTGATTTGAGCTATAA
ACCACAGCTTAAGATAAATAAGAATGAAGACACGGTAGTTTATTATGACCATGTTACATATTTTACATTCACTGTCCAGCCCCTCA
ACCTTGATTAGTTATTTTTCTGCCTCCAGCCGAAG
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GenBank top hits (Blast detail) | Score | e value |
XP_002876105 hypothetical protein ARALYDRAFT_485538 [Arabidopsis lyrata subsp. lyrata] | 187 | 7e-012 |
NP_190751 SAC domain-containing protein 8 [Arabidopsis thaliana] | 182 | 3e-011 |
BAH56894 AT3G51830 [Arabidopsis thaliana] | 182 | 3e-011 |
XP_002532110 suppressor of actin, putative [Ricinus communis] | 162 | 6e-009 |
CAN61566 hypothetical protein VITISV_027268 [Vitis vinifera] | 160 | 9e-009 |
Swiss-Prot top hits | Score | e value |
No hits found | | |
TrEMBL top hits (Blast detail) | Score | e value |
C0Z2G5 AT3G51830 protein | 182 | 2e-011 |
Q96328 G5p | 182 | 2e-011 |
B9T1J1 Suppressor of actin, putative | 162 | 4e-009 |
A5BMH3 Putative uncharacterized protein | 160 | 7e-009 |
B9IGB3 Predicted protein | 159 | 8e-009 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G51830.1 ATG5; phosphatidylinositol-4,5-bisphosphate 5-phosphatase | 182 | 1e-013 |
AT3G51460.1 RHD4 (ROOT HAIR DEFECTIVE4); phosphatidylinositol-4,5-bisphosphate 5-phosphatase/ phosphatidylinositol-4-phosphate phosphatase | 132 | 6e-008 |
AT5G66020.1 ATSAC1B (SUPPRESSOR OF ACTIN 1B); phosphatidylinositol-4,5-bisphosphate 5-phosphatase | 122 | 9e-007 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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