Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN33793

FASTA Sequence
Unigene ID: UN33793Length: 1393 SSR 
CAGTCATCACAACAATAAATTTGAAAACAAAAATGTTTGGTAAAAAACAACATGAACCGTTTTTTTCAGGTTGGTATAACTAATCG
TGAAGCAGGAGAAGACTGGTGGAGCAGTAACCGAAGTACAGAGACTAGCAAGATCAACTGCGTCAAGAAATACAAGCTGGACTTGC
ATGTTTTTCCTAACATGTTCCCACGGTTCGGTTCAGGATCTTGAGTCACAGAATGTTGTACCTTCTTCGGTTGTTCTTCGAGTACT
TGTGTTGATGATGATGCACTCAGAGAACTTGTGAGCAACAAATGCTGGATTTCAGCTTCCATCTTTCTCTGGAAAATTCCTTCAAG
TTCGGATTCGATCATCGAGTTTTCGGTTCTTGGATCCTGGCTTCCTTTGCATCCAGATCAGCTCTAGCTTCCTCGAGTTTAACTTG
GAGATGTTTTACCTTGTGCTTCAAAATCAGTACTTGTGATCCTGAATCGACTTCATCAATGTTCGAATGTTGTGGTATAGATTCCT
TACTCAGCTCCTGGAAACTTTGGACCTCTTTCCAAAGAGCTTCCTGCAAAGCTGCAAGACATCTGATAGAATCTGCAATGTGATCC
TTATCTGCCGCCCAATCATGTTCGTTCTTCTTCTTATGACTCTCATCTCCTCCGTTCTCGCTTCTGCTATATGTTTGGACTTGTTC
CCTATCTTGACTTTCTGCTATATGGTTCGCAGCAGAAACTGAGGCACTAGAAAACACAAAATCATCACTTCTCACGTCCGAATCTA
TGCGCTCTTCGCTTCCATTCTTGATGGGATCCCTCCCTTGGCTACCTGAAACAATCTTCCCTCCTCCTCCGGTATGCTCTTCACTC
TTCTCAAAACCTTGGCCTACATTAAACATAAAACCTGGAGCCGGACTAAACCCGTTGACTACACCTGGAAGAAGATGATGATGATG
ATGCACGGCCATATTCACAGATCCAACAGAGCATTCTTCGCTACCCTGTCTTGCTTCAACCGAAGACATGTCCACATGTTTAGACG
GAGGGTTCACCAAACCAGTCAAATTACGCTTCAGCAACTTACTACCATCATCAACAGGCGCAGCAGCAGCAGCTTCGTCTTTCACT
GGAGGAGTATCTCTCTTGATCCTTCTCCATTTCTTCAAACCGAAACCTTTTCTCGTCGAACCACCCGGAGATTCAACCTTTAAGCT
GTCAACGCTGTTGGATCTTTGAGGTGATCCAATACCATTTACACTCTCTTTGTCCATAGTGATCTGTGATTCGTAGCACTAAGACA
ATCATTCAACTAAGGCTTCCCTTAGACATCAATGGGGTCATGCGACGGAGAAAGACGCCGACATTATTGAGGTTGAGTTTAGATTA
TTACCACCGGGAGTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884963 predicted protein [Arabidopsis lyrata subsp. lyrata]5372e-052
BAB02805 unnamed protein product [Arabidopsis thaliana]5328e-052
NP_566455 WPP domain-interacting protein 3 [Arabidopsis thaliana]5328e-052
XP_002869610 hypothetical protein ARALYDRAFT_492167 [Arabidopsis lyrata subsp. lyrata]1716e-010
NP_001154269 WPP domain interacting protein 1 [Arabidopsis thaliana]1627e-009

Swiss-Prot top hits (Blast detail)Scoree value
Q94AV5 WPP domain-interacting protein 35323e-053
Q8GXA4 WPP domain-interacting protein 11623e-010

TrEMBL top hits (Blast detail)Scoree value
B9N5J9 Predicted protein1643e-009
B9GHK4 Predicted protein1562e-008

Arabidopsis top hits (Blast detail)Scoree value
AT3G13360.1 WIP3 (WPP-domain Interacting Protein 3)5323e-054
AT4G26455.1 WIP1 (WPP-DOMAIN INTERACTING PROTEIN 1); protein heterodimerization/ protein homodimerization1622e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information