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Information for unigene UN33883

FASTA Sequence
Unigene ID: UN33883Length: 1219 SSR 
AAATCTGGAAATGGAACATACAAAAGAGGTGTTTTCAACTCTTTTTAAACCTAACAGATTGTTTCCTCTTGCCTAGTGCCAAAGAA
AAGTTATTGCTAAATCACCAAATGTATCCCATCTTTACTCCGAGTAAACACTTTGGCAAATCCATTCCGGTTCTTATCAGAACTCC
CTCTGTTTATTGATGAAGCAGCATCAGAAGATGATGTTTCTTTGGTAGGTTTCATGATTGCCATGTAAGTATCATTCTTGTGTACT
CTCCAACTCTCTGTGTTGCTGCTTACACCATTAGTAGCAGCCACTGGAATGCTCGCTGTATCGACCAAGAAGTCTTCAAGCGTCGC
CAGAGACTGTAACTGTTTCCCCAACGAAGCTATTGTCTTCTGACAGTTAGCTAGTTTCCCTGCAGCCGTTGCCATGTCTTCCTGTT
TGATCTTGGGTGGTTCTATAGCGTTTTCTTGATGGAGAGTGACTTCTTCTTCAAGAGCCTCACATTTTCTTCTAAGCTCATCAGAA
GCTAACCTCTCCTTTCTCGCTTGGCGTAACTGTCTGACACACTCCTTGAGAGCTCCGTCGAGATGGCTCACTCTATCTTCCAATAC
TCTCTTGTTTTCATCAGCGGCTTCCAGCTTCTCCTTTAACTCAACAGCTTCGTTCTCAGCTTTCTCCCATCCAGCGACAGCTTCTT
CAGCTACTTTGACGTGTTGGTTCACCAGATCATCCTTAGCACTCACATTAGCAAGAGCAGCTGAAAGCTTCTCAGTTAGAGTCCTG
ATGCTATCTTTTAAATCTTCATTCACAGTTTCCCCTTCAAGAGAAGCCTCCGCAGGTTGTTTTGTCTCATCTTCATGACTCTCCAT
TGTGCTCTCAGGTTGAATGTCAGATTGGGAAGAGACTACAGAATCTGATTCACCAAAGCTTCTCTCAGATGACTCACTCTTGCCTT
TCTCCATTACAAAATCAGCACCATACCCACACAGTCTCAGGATACAGAGACCACCACCACCTTTGTCCGATGAATGGGACTATGGG
AGAACCTGTCTGAAGAAGCTTTGAGATCCGATAATGTCACCAATGGAAAACAAAAGATCAAAGCTTTCTTGTATTGTCTGGAAGTT
AAACACTATTACGATTTTTAACAGCGACAAGGCGCAGGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGATAATTCTCTCTATCT
TTGTTTTTTTGCTTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889148 hypothetical protein ARALYDRAFT_476922 [Arabidopsis lyrata subsp. lyrata]5632e-055
NP_974162 filament-like plant protein 1 [Arabidopsis thaliana]5471e-053
NP_177881 filament-like plant protein 1 [Arabidopsis thaliana]4431e-041
XP_002302234 predicted protein [Populus trichocarpa]3883e-035
XP_002306637 predicted protein [Populus trichocarpa]3866e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q9CAP9 Filament-like plant protein 15475e-055
Q9MA92 Filament-like plant protein 33389e-031
Q9SFF4 Filament-like plant protein 23065e-027
Q8LLE5 Filament-like plant protein (Fragment)2618e-022
Q9C698 Filament-like plant protein 62456e-020

TrEMBL top hits (Blast detail)Scoree value
B9GU37 Predicted protein3882e-035
B9H7F1 Predicted protein3864e-035
B9RJ40 DNA double-strand break repair rad50 ATPase, putative3774e-034
B9H4P1 Predicted protein (Fragment)3552e-031
B9HF67 Predicted protein3533e-031

Arabidopsis top hits (Blast detail)Scoree value
AT1G77580.2 myosin heavy chain-related5475e-056
AT1G77580.1 myosin heavy chain-related4435e-044
AT1G21810.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G77580.2); Has 62951 Blast hits to 33517 proteins in 1593 species: Archae - 800; Bacteria - 6354; Metazoa - 33836; Fungi - 4765; Plants - 2651; Viruses - 311; Other Eukaryotes - 14234 (source: NCBI BLink).3826e-037
AT3G05270.1 EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G77580.2); Has 97002 Blast hits to 49715 proteins in 2003 species: Archae - 1158; Bacteria - 12418; Metazoa - 49297; Fungi - 7501; Plants - 3801; Viruses - 453; Other Eukaryotes - 22374 (source: NCBI BLink).3388e-032
AT3G05270.2 EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G77580.2); Has 97002 Blast hits to 49715 proteins in 2003 species: Archae - 1158; Bacteria - 12418; Metazoa - 49297; Fungi - 7501; Plants - 3801; Viruses - 453; Other Eukaryotes - 22374 (source: NCBI BLink).3388e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information