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Information for unigene UN33955
| FASTA Sequence |
| Unigene ID: UN33955 | Length: 933 |
SSR | | CTTTTGTTCTGTTTAATAATAATACAAACCAACAAATATGAAAACGAAAATGACACATTACATAATAGGGATACTGTGATGAATAG
CATCTTCTTCTTCTTCTTCCTCTAGTCAACATGGCCGCAAGGCTTTGATTATGGAATGTATATCTAAAAAGATATACACACCCGTT
GTCTTTAGTTTTGGGATCTTCTGTGCAAACTTGGTTTCACTGTTGTTGTAACGGGTTCAGGCGGCGGTGGCTGCGGCATTGTTTGG
CTATTACCTTCTGTGGCGGCTAGAACTGTCTCTGTGTTTGGAGTTGAAGATGGATCGCTTTTTTCTTCCGAAGGAGTTTCCTCGAC
CACAGGAGGCTCAGATACTGTCTCTGTCACTGGTCCATCAACATGTGCTGCTGCCTCAGCAACAGCTGCAGCTTCCGGTGCTGCTG
ATTCAGAATCAGCGGCAGTTTCTCGTGCTTCTGTCTCGGAAACAGCTGCAGTTTCCGGTGCAGCTGACTCAGAGTTAGCTGCAGTT
TCTGGTGCAGCTGACTCGGGATCAGCTGCAGTTTCAGGCGTAGACTCGGTCTGTGGTTGCTCAGAAGATGGAGGAGCTTCAATTGG
AGGATACGTTACTTGCTGCCTCCCCGTTGCTGCATTCTCTGTTGGTTTCACTGTTGTTGTAACGGGTTCAGGCGTCTTCAGTGTGG
GTAGTGGTTTTTTGGGAGCAGAGATGGAAGCAAAGATTGAAGACATTCCGGGAGGGAGAATCTCGATTGGAGGCTTTTTGGATGCA
TCAGATAAACTCGTGAGCTTTGAATCCTCAAGAGAAGCCAAAAACGCACTTGCGGCATCGGTTTTAGAAGATGGAGCTTGCTCAAC
TTCCTTCTGCAGCGTTTTATTCCAAGCCTGAACCAAGTTCTTTAGAGTTGGACGACCATGTGCATGGGCATGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAF01929 hypothetical protein [Arabidopsis thaliana] | 728 | 8e-075 |
| BAB09653 unnamed protein product [Arabidopsis thaliana] | 727 | 1e-074 |
| NP_197859 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 727 | 1e-074 |
| XP_002874217 hypothetical protein ARALYDRAFT_489332 [Arabidopsis lyrata subsp. lyrata] | 634 | 7e-064 |
| ABD32846 hypothetical protein MtrDRAFT_AC149038g31v2 [Medicago truncatula] | 390 | 1e-035 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P13627 Cytochrome c1 | 146 | 1e-008 |
| Q39967 Major latex allergen Hev b 5 | 135 | 2e-007 |
| P45386 Immunoglobulin A1 protease autotransporter | 122 | 7e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WLS8 Putative uncharacterized protein At5g24710 | 728 | 6e-075 |
| Q9FIR4 Genomic DNA, chromosome 5, P1 clone:MXC17 | 727 | 8e-075 |
| Q2HV03 Putative uncharacterized protein | 390 | 9e-036 |
| Q8L7Q1 Putative uncharacterized protein At5g24710 | 376 | 4e-034 |
| B9SJU7 Putative uncharacterized protein | 370 | 2e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G24710.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like (InterPro:IPR015943); Has 46946 Blast hits to 23834 proteins in 1336 species: Archae - 160; Bacteria - 9572; Metazoa - 15324; Fungi - 6794; Plants - 1938; Viruses - 1106; Other Eukaryotes - 12052 (source: NCBI BLink). | 727 | 4e-077 |
| AT3G28780.1 unknown protein | 121 | 8e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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