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Information for unigene UN34017
| FASTA Sequence |
| Unigene ID: UN34017 | Length: 777 |
SSR | | ACAAACTCCCAAACTTTTTTTTTCATTTCCGGATCACACTATCACAGCACAGAGATAACCAGAATTTGAAAGAACACAAAGCCAAA
CAATCTCCGACCAAAAAAAAAGAAGAAAGAGATGAAAGATTACAACATTCGTTTTCTTAGTTATCCATCAATCACTGCTCTCAAAA
CAACCTAAGCGTACACTGATCCATAAGAGAGAGCCATGAGAAGCACCGCCGCTTGCTCTTCCTCCCCGAGCTTCCGCAGCTGCTTC
TCCACCGTCGATGATGATCGCTTCGTCATCCCCAAATCCATCATCCTCTGTTTCATCGATTCACCAAATTTAGGGTTTCTCTTCAG
ATCGCCGCCGCCGCCGGAGTTAGATTTCTTCGGCTGCTTCTTGTCTTCCCCTCCTCCTCGTCTTTTCTTCCTGTTTCTGATCCCAC
ACGCGTTACAAAGCGACTTTGGAACGGCGGGACCGCCACGCCAGAGAGGAGTTTTGCTTGTACCACAATCGGCGCAAGTCTTCTTG
TCGTTACTACAAGCCTTGTTCTGTTCGATCACATCCTCTCCACCTCTTCTTCTCTCCGAATCCTTCTCGCTGTGATCTAGCATTTC
TCCACTTCCCGATGATCAGAATCGCTAGGGTTTAAGATTGATCGCGTCTCTTCGGGAAACAGAGAGATCAGAAAATTTAAAAAAGC
AGAGGAGAGTGAAGAAGAGTGTAGAGAGAGAGAGAAAGTTTTTTAAAGAATAGAATAGAACTGAACCGACATACACCTACGCACGG
TCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199741 GATA transcription factor 16 [Arabidopsis thaliana] | 458 | 1e-043 |
| XP_002865725 hypothetical protein ARALYDRAFT_917909 [Arabidopsis lyrata subsp. lyrata] | 416 | 9e-039 |
| XP_002275498 PREDICTED: hypothetical protein [Vitis vinifera] | 373 | 9e-034 |
| NP_566290 GATA transcription factor 15 [Arabidopsis thaliana] | 362 | 2e-032 |
| AAF63824 hypothetical protein [Arabidopsis thaliana] | 362 | 2e-032 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FJ10 GATA transcription factor 16 | 494 | 4e-049 |
| Q8LG10 GATA transcription factor 15 | 362 | 8e-034 |
| Q9LIB5 GATA transcription factor 17 | 206 | 9e-016 |
| Q5HZ36 GATA transcription factor 21 | 162 | 1e-010 |
| Q8LC59 GATA transcription factor 23 | 162 | 1e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0SVS9 Putative uncharacterized protein At5g49300 (Fragment) | 458 | 8e-044 |
| B9MZZ3 Predicted protein | 351 | 2e-031 |
| B9RZK8 GATA transcription factor, putative | 346 | 8e-031 |
| B9HX95 Predicted protein | 334 | 2e-029 |
| A5BCR3 Putative uncharacterized protein | 289 | 3e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G49300.1 zinc finger (GATA type) family protein | 495 | 3e-050 |
| AT3G06740.1 zinc finger (GATA type) family protein | 365 | 3e-035 |
| AT3G16870.1 zinc finger (GATA type) family protein | 206 | 9e-017 |
| AT4G16141.1 sequence-specific DNA binding / transcription factor/ zinc ion binding | 205 | 1e-016 |
| AT5G56860.1 GNC (GATA, nitrate-inducible, carbon metabolism-involved); transcription factor | 162 | 1e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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