RadishBase

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Information for unigene UN34040

FASTA Sequence

Unigene ID: UN34040	Length: 704	SSR
GTGTGGATCGATTCCATAACCATCATCATCATAGTCCGATCATCGTTACTGTTGTAAAGGTTTATCTCTAATCGTTTCAGGGTTAG GTAAACGGTTTACAAAAAGTTTTCTTACTCTATTGTATGGAGTAAGAAATGCCAGAGTTAAGAAGTGGAGCACGTAGATTGAGACA ACCTAGACCTCAGGTGATTGATCAGGCAGATAATATCGAGCTTCCTCCTCCTCAGACTACAACAAGGAGACGAGGTGGTGGTGGTG GTAGAGGAAGAGGAACAGCTGCAGCTTTAGCAAAAGCCGCCGCACCTCCAAGACCGAGTGTTGCTGCCGGTAGGGGTCGAGGCATC AGGTTGATAGATTTAGAAGCAGAGCCTATAGGTGAACCTGCTTTTAATCAAGTCGAAGGGGGAGCTGATAAGGGTATCGCCATGGA AGGTGGTAGTCCAGAGAAGATAGTTGGTGCCGAAGAAGATCCAAGCACAGCTCCAGTCCCTGAAAGGGTACAAGTTGGAAGCTCTC CTGTTTATAAGACCGAGAGGAAACTCGGCAAAGGAGGCTTTGGTCAAGTTTTTGTCGGTAGAAGGGTGAGTGGTGGCAGTGATAGG ATTGGCCCTGATGCAATTGAGGTGGCTCTGAAATTTGAGCACAAAAATAGCAAAGGATGCAATTTTGGCCCACCTTATGAGTGGCA AGTGTACAGTAATCTT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002873876 kinase family protein [Arabidopsis lyrata subsp. lyrata]	802	1e-083
NP_197320 protein kinase-like protein [Arabidopsis thaliana]	781	4e-081
NP_187044 protein kinase-like protein [Arabidopsis thaliana]	714	2e-073
XP_002325416 predicted protein [Populus trichocarpa]	652	3e-066
ABN09797 Protein kinase [Medicago truncatula]	650	5e-066

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q9FK52 Casein kinase-like protein	781	2e-081
Q9SQR8 Putative casein kinase	714	1e-073
B9IPP9 Predicted protein	652	2e-066
A2Q5N5 Protein kinase (Fragment)	650	4e-066
A5C016 Putative uncharacterized protein	485	5e-047

Arabidopsis top hits (Blast detail)	Score	e value
AT5G18190.1 protein kinase family protein	781	2e-083
AT5G18190.2 protein kinase family protein	781	2e-083
AT3G03940.1 protein kinase family protein	714	9e-076
AT3G13670.1 protein kinase family protein	352	9e-034
AT2G25760.1 protein kinase family protein	299	1e-027

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


11	2			100%

Unigene Members	Member information