 |
Information for unigene UN34043
| FASTA Sequence |
| Unigene ID: UN34043 | Length: 849 |
SSR | | GGACCATTGATTCAAGATGCAATCAAAGATCGTCGGCGGCGGCGGCGGCTTACCCCCGGCGTTTTCTCTCATCCCAAGCTTAAACG
AAACCTTCACATTCCACCAAATCCTCGTCCTCATCATCACCTTCGTAGCCTACGCTTCGTTCCGCGCCTCTCGCAAACCTCCAAGC
ATCGTCAAGAGCGTCCTCGGACCTTCCCTTGAACAAGAATCAAACAACGGATGGGCTCCGTTCAACGGAACCGAAGGAACAAAGAG
ACTCGGCGAGCTCGATCTAGCCTTCCTTTCTTCCTACGCTCTCGGTATGTATTTCGCTGGTCACTTAGGAGACAGGATCGATCTGA
GGCTGTTTCTCGTGTTTGGGATGATGGGAAGTGGGATCCTCACCGTTGCTTTCGAGTTAGGGTATTGGATGAACGTGCACCTCCTC
GGGTTTTACATGACTGTTCAGATTGTTTGTGGGTTGTTTCAATCTATTGGGTGGCCTTGTGTTGTCTCTGTGGTTGGCAACTGGTG
CGGGAAAGAGAAGCGTGGGTTGATCATGGGTGTTTGGAACTCTCATACTTCTGTTGGGAACATTGTCGGCTCGGTTGTTGCTTCCT
CGGTGCTTGATTCCGGGTGGGGATGGTCTTTTGCTTTGCCTGGTGGGTTGGTGATTGTGTCTGGATTGGTTGTGTTTATGTGTCTT
GTTGTCAGTCCTCGTGATTTGGGGTTTGAAGAGCCTGGGAAAGATATTGAGATGAGTTTAGCTGCTGACACTGTAGAGGAGGACAA
AGAAGATGATGATGTTGGGCTTCTTGAACTATAGATCTAGATGATGATGATGATTCTTTGTCAGCTATTGGTTTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178954 putative glycerol-3-phosphate transporter 5 [Arabidopsis thaliana] | 1056 | 7e-113 |
| AAD25685 putative membrane transporter [Arabidopsis thaliana] | 1056 | 7e-113 |
| XP_002267328 PREDICTED: hypothetical protein [Vitis vinifera] | 902 | 5e-095 |
| CAN70162 hypothetical protein VITISV_043651 [Vitis vinifera] | 895 | 3e-094 |
| XP_002324576 predicted protein [Populus trichocarpa] | 780 | 7e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P57057 Glycerol-3-phosphate transporter | 483 | 8e-048 |
| Q58CV5 Sugar phosphate exchanger 2 | 457 | 9e-045 |
| Q8AVC3 Sugar phosphate exchanger 2 | 452 | 3e-044 |
| Q5M7K3 Sugar phosphate exchanger 2 | 446 | 2e-043 |
| Q7SY29 Sugar phosphate exchanger 2 | 441 | 6e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SL56 Putative membrane transporter | 1056 | 5e-113 |
| A5BGY4 Putative uncharacterized protein | 895 | 2e-094 |
| B9IML0 Predicted protein | 780 | 5e-081 |
| B9T0L8 Glycerol-3-phosphate transporter, putative | 618 | 3e-062 |
| B9MUJ6 Predicted protein | 601 | 3e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G13100.1 glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative | 1056 | 3e-115 |
| AT4G25220.1 transporter, putative | 641 | 4e-067 |
| AT1G30560.1 transporter, putative | 627 | 2e-065 |
| AT4G17550.1 transporter-related | 588 | 5e-061 |
| AT3G47420.1 glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative | 582 | 2e-060 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
