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Information for unigene UN34131
| FASTA Sequence |
| Unigene ID: UN34131 | Length: 1065 |
SSR | | GAATCGTTTGGAAAATTTTAAAATAACCAACGACACTGACATTAAGTTAAAGCAACAAAGTGAATAATATTAAAGCTAAAACTAGA
GTCTTTAAATAAATAATATGATGCTTTACGTTTACAAATCTTCTTACTCCTCCTTTTGCTTCACAGAGGGAGTGCGACGTGTGTAG
CGGTATCCACTAGTCAACCTTCCTACAAACTTGAGAACTTCATCTATCAGTATCACCGGAAGCGACACAGCCAACACTAGCAGCCA
CTCGTTCAAACTCAGCGGCACTATCCCTGCAAACACCATACATTTCTTCCCCTGAATATCAGCCCCTTCCTCCACAGGCTTAGTAG
TCTTACTCACCGCCTCACTCTCTCCCGTCAAAGACCCCTGCTCAACTCTCAGCGTGGAGCTAACCAAACCAACAACACGCATATCA
GCAGGGACCTTATCACCCACCCTGAGCTCCACAACATCCCCGGGAACAAGCTCCTTAGCAGGCAAGCTAGAAACTTTAACCCCGTC
CCGCGTCACAGTCGCCTGCTGAGACTGAATCTCCTTCAAAGCCTCCAGTGCCTTCTCGGCATCAGTCTCCTGCCAGATCCCAACGA
TCGCATTCACAATCAAGATCAAGAAGATCACAAGCGGCTCAACAAAGGCAGTGATCCCCATCTCACCTCCTTCATCTCCATCGACA
AAGGCCAGCACGAAGGATATAACAGCCGCCGCCAAGAGGATACGAACCAACGTGTCGTTGAACTGCTCCAGAACCAACTTGAAAAG
CGACGTCCCTTCAGGCTTCTCTAACTCGTTCAAACCGTAGATCTGATGACGTGTCAACACCTCATCGGTAGTTAAACCTCTCTCAA
CGCTGACGCCGAAGTGCTCTTCGCATTCTCTAACGTCTTTGGCCCAAGCGAGGAATGTATCAGGCTTTAACGATTCGGAACCGTTA
CTCTGCTCTTCCCCTCCTTTCCCCATTCTCTTCGCCTCCTCCACAATGTTTCTACGATGCGGAGATCGTACGCCTCTCTCTCTCTC
TCTCTTCTTCTACGGAGGCCTTTATATATATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172246 Ca2+-transporting ATPase [Arabidopsis thaliana] | 1008 | 4e-107 |
| ABJ90443 endomembrane Ca2+ ATPase 4 [Arabidopsis thaliana] | 1004 | 1e-106 |
| XP_002889666 calcium-transporting ATPase 1, endoplasmic reticulum-type [Arabidopsis lyrata subsp. lyrata] | 996 | 9e-106 |
| XP_002892413 endoplasmic reticulum-type calcium-transporting ATPase 4 [Arabidopsis lyrata subsp. lyrata] | 985 | 2e-104 |
| NP_172259 Ca2+-transporting ATPase [Arabidopsis thaliana] | 983 | 3e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XES1 Calcium-transporting ATPase 4, endoplasmic reticulum-type | 1008 | 2e-108 |
| P92939 Calcium-transporting ATPase 1, endoplasmic reticulum-type | 983 | 1e-105 |
| Q42883 Calcium-transporting ATPase, endoplasmic reticulum-type | 633 | 5e-065 |
| O23087 Calcium-transporting ATPase 2, endoplasmic reticulum-type | 602 | 2e-061 |
| O14983 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 | 521 | 5e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0A076 Endomembrane Ca2+ ATPase 4 | 1004 | 7e-107 |
| B9HPP7 Endoplasmic reticulum [ER]-type calcium ATPase | 860 | 4e-090 |
| A5C4X8 Putative uncharacterized protein | 839 | 1e-087 |
| B9T3I7 Calcium-transporting atpase 4, endoplasmic reticulum-type, putative | 828 | 2e-086 |
| B9N6L9 Endoplasmic reticulum [ER]-type calcium ATPase (Fragment) | 780 | 7e-081 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G07670.1 calcium-transporting ATPase | 1008 | 1e-109 |
| AT1G07810.1 ECA1 (ER-TYPE CA2+-ATPASE 1); calcium-transporting ATPase | 983 | 1e-106 |
| AT4G00900.1 ECA2 (ER-TYPE CA2+-ATPASE 2); calcium-transporting ATPase | 602 | 2e-062 |
| AT1G10130.1 ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3); calcium-transporting ATPase/ calmodulin binding / manganese-transporting ATPase/ peroxidase | 450 | 7e-045 |
| AT4G30190.1 AHA2; ATPase/ hydrogen-exporting ATPase, phosphorylative mechanism | 201 | 5e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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