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Information for unigene UN34140
| FASTA Sequence |
| Unigene ID: UN34140 | Length: 917 |
SSR | | ATATCTACTGATCCATGTATATATATTAATCTTTGAACATGCAATAACAAAATCTCAGCTCAAGAAACGTAAAAGTCTAAGTGAAA
AGATTTACTTGATAGAAAGTGGAAATAACGAACCAGAAGAGATAAAGATAACACTAGCCACTACCTCAACTCTACACGTTGCTCAT
CTAATCTTTTTCTACCTACAAAGTGCTGTGTACAAACAAATAGTTATCTTTCCGGATTGTACTTGAGATGTTGCTCGTAGAACTCA
ATCAGCAGAAGAGGATTGTGAGCCTTGAGAAATCTATTGTCTACTGTTACTTCCTTCCCATCAGACCTCAACGCGGAAAAGGTAAC
CAACGCGTCTTGTACATTGTTTGTTATAGATGAAGAAAATCTCGCTGGCTTGATGATCCTCACTATGTCCAATTCCTCCACCTTGC
TTTTCTGAGAGATACTGTTATTTTCCAACACATTCCCTATCCTTGCGGTTTTACCAAAGAGTCTAAGGTAGTCAACTCTGGTGTCT
GGTTCTGATCTGGTGTAGTAGCTTTTGTGTGGTTGTTGTTGTTGTTACTAGCGGTTCCGTCTTGTTTGAATCTTCTCACAGAACCA
GACTTCCTCCGTTTAGCACCTATGAAACGACTGTCCTTATCAAACTCCTTGGGATAAACCTTGAGAAACCCATTTGCTCTTACATT
ATCACCCTCAGAACCAATGCCCGGTCCCCTTAGCTCGTTAAGTGTTGGATCGTATTCTTTCTCCACTTCAGCCAAACTAACTTGCC
TCAACATACCAACACTCCTGCTATTAGCTTCAACTTGGTTGGTGGCGGCTACATAACCGCTGAGATCCAGTGGACCGCGAATACCA
GGGAGGCTAATGTTGTTAAGAGATGTAGAAGAGTCAGACTTCTCAGCATCATCATAC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002873843 predicted protein [Arabidopsis lyrata subsp. lyrata] | 339 | 1e-029 |
| NP_197271 chromo domain-containing protein LHP1 [Arabidopsis thaliana] | 319 | 2e-027 |
| AAL04059 like heterochromatin protein LHP1 [Arabidopsis thaliana] | 319 | 2e-027 |
| XP_002325456 chromo domain protein [Populus trichocarpa] | 240 | 3e-018 |
| XP_002523971 Heterochromatin protein, putative [Ricinus communis] | 239 | 4e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q946J8 Chromo domain-containing protein LHP1 | 319 | 1e-028 |
| Q339W7 Probable chromo domain-containing protein LHP1 | 205 | 2e-015 |
| Q944N1 Chromo domain protein LHP1 | 170 | 2e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q058P7 At5g17690 | 319 | 1e-027 |
| B9IPZ2 Chromo domain protein | 240 | 2e-018 |
| B9SDA2 Heterochromatin protein, putative | 239 | 3e-018 |
| A7M6F9 Like heterochromatin protein 1 | 231 | 2e-017 |
| A7M6G0 Terminal flower 2 protein | 231 | 2e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G17690.1 TFL2 (TERMINAL FLOWER 2); DNA binding / methylated histone residue binding | 319 | 9e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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