Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN34160

FASTA Sequence
Unigene ID: UN34160Length: 959 SSR 
CCTTAAACCTTCACAGGCATGGAAACTTCCCAGCCAGCATAAGGTAAAGTCGTAAAACGAATTCTATTTGCAATAGTCTATAGTCT
ATCAAAGTTTGCAATGTCAAGATCTTGACTTTAGTTGATGTGTAATGTGCTATTTTACCAACATGTTTTATATAGTCGAAAATTTC
TTGAAATGCCTAACGTCGGTTGACAATTATAAATTGCGGAAACAGAAGTTGGTCAAAATTTTATTATACAAGTAAAGTCATTAAAG
ATCAATCAATCTTCAACTTGAACACCAATTCATGATTGTCGAGGACGTAGTTTAATTACGCTTTAGTTACGGTAATTATTTGTCTA
ATTGTTTTAGTGAGAAACAGATATATATATATACGTGTGAATATTATTCTGTAATATGATATATATATGTTTAGTTTGAACTTTGT
GTCTTTGTGGCACCGTCAAATTATGTACACACACAATTATTGACTTGAACTAGTATGTATTCAAAAATCAACGTTCTTCAAAACCC
TATAAATAATCCAACACACTTAACACAGTTTCTCAAACCGAACACACAATAAAGCTCTAAACAAAAATCAAAAGATGTCTCAAATT
CTCATGTTCTTGGTCACCCTTAGCTCCCTCTCCTTATTGTCATCTCTTTCTCTCGCCGCAGGGCCTCAGGCCACCGGAAACGCCAC
GTCCCCATCAAATGTATGTCGCTACGCACCGGATCCATCTTACTGTAGATCGATTCTCCCAAACCCACCCGGAGATGTTTACTCCT
ACGGTCGTTTTTCTCTTAGACGGTCCATCTCACGTGCCAGGCGGTTCATCTCACTGATCGACTATCAACTAAACCGGAAAGGCAAA
GTGGTTGCTAAATCTACCGTGGGGGCACTCGAAGACTGCAAATTCCTAGCCAGCCTGACTATAGATTTCCTCCTTAGTAGCTCACA
GAGCGTAGATGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAK84428 papillar cell-specific pectin methylesterase-like protein [Brassica napus]5551e-054
XP_002880312 pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]4886e-047
NP_566103 pectinesterase 20 [Arabidopsis thaliana]4699e-045
NP_567227 pectinesterase 41 [Arabidopsis thaliana]2484e-019
AAL87311 unknown protein [Arabidopsis thaliana]2484e-019

Swiss-Prot top hits (Blast detail)Scoree value
O22256 Probable pectinesterase/pectinesterase inhibitor 204694e-046
Q8RXK7 Probable pectinesterase/pectinesterase inhibitor 412482e-020

TrEMBL top hits (Blast detail)Scoree value
Q7XAF8 Pectinesterase5557e-055
B9SAU3 Pectinesterase2619e-021
B9GSC4 Pectinesterase2341e-017
B9I9P7 Pectinesterase2242e-016
B9RFE2 Pectinesterase2196e-016

Arabidopsis top hits (Blast detail)Scoree value
AT2G47550.1 pectinesterase family protein4694e-047
AT4G02330.1 ATPMEPCRB; pectinesterase2482e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information