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Information for unigene UN34208
| FASTA Sequence |
| Unigene ID: UN34208 | Length: 1088 |
SSR | | TCATAGATTTTATTACTACCATGACTCCAACATGTAGTCCTCTTGAATTACTACAAAAACAATACCAAACGCCAAGATACTGGAAT
CTTACAATAGGTTTGGATTTTCAGACTGGAGCGGACTCTGCTTCCATATACCTACAAATCCTCTCCATAACCTCTCGCCCTTTCAC
GCTGTTTTGCATGAACTTCTCGGCGCACTTCTGCTCAACTTTCTCAGCCATTGAGGCCAGAGCCGACAAGGGTTTGATTCGAATGC
TTGTCTCCTGGCTACAAACCGTCCAGGCCGACGGATTTTCTGGATGAGGATCGTATCTTATCCTCTCCTCCACTTCAATGAACTTT
TTGAGAGTAATGTTCTTTGTTGTAAGCTGAATGAAAACGAAATCATTAACTTAAGACATCTTTTTTCTCCATGTTTACAAGCCTAC
TAACTGATGTATTAGGCCAACATAGATACTCCTCTATGATTGTTCTTCTAGAAACAAAAACTTTATCATGACAAATCAAGCTTCAG
TCAAAACAGATTACAAGAAACTAAAACCAGTTTCTCATCTTACAAACTAGGCCATGTTTCACCAACACTACTGCAATATATAAAAG
CTAATCTAAGGTTGTCTATGCCCCGTCACAACTCAACTATTAAATGCTTCATTCCAATCAAGCTAGGAGGAAGAAGAAGAAAGCAT
AGAGAAGGCGAAGATAAACCTGCATAGAACGTGATTTGGCATCCACAACAGTAGATTCAACACAGTGACAGATGTCCTGGCCTATG
ATCCGGTGGAGGAACCATGGACCGGGAGCATGAATGGTGAGTGCACGGGTGGTGTGGAGTTTGCCGGTGACAGTGTCGAGTTTGCG
GTTCAAGGTGTCGACTTCAAGGGTGTGAGAAAGGATGCGTTTGTTTTCAGGGTCAGCAAACTTCCTCCAGGAGGCAGCACTCACCC
GCTCCCACGGATGCTTGTAGACATGCTCTTGTTTATATGCTTTTACCATCAAGAAAATCTAGAGAGAGAGAGAGAGAGAGAGGTAG
GCAAGGCAATTGACGATCCTGTCTTTGATGGTGAGCGTAGAAGAAAATAACCCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196811 MSF1-like protein [Arabidopsis thaliana] | 500 | 3e-048 |
| XP_002871545 hypothetical protein ARALYDRAFT_488123 [Arabidopsis lyrata subsp. lyrata] | 500 | 3e-048 |
| XP_002285535 PREDICTED: hypothetical protein [Vitis vinifera] | 453 | 8e-043 |
| XP_002535293 Protein MSF1, putative [Ricinus communis] | 450 | 2e-042 |
| XP_002513465 Protein MSF1, putative [Ricinus communis] | 450 | 2e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O59707 PRELI/MSF1 domain-containing protein C36.10 | 149 | 6e-009 |
| A5GFX0 Protein slowmo homolog 2 | 135 | 3e-007 |
| Q9CYY7 Protein slowmo homolog 2 | 134 | 4e-007 |
| Q58DB0 Protein slowmo homolog 2 | 133 | 5e-007 |
| Q9V3U9 Protein slowmo | 133 | 5e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FYA3 At5g13070 | 500 | 2e-048 |
| B9RI96 Protein MSF1, putative | 450 | 1e-042 |
| B9TAM4 Protein MSF1, putative | 450 | 1e-042 |
| B9GM79 Predicted protein | 437 | 4e-041 |
| C6SVJ7 Putative uncharacterized protein (Fragment) | 434 | 9e-041 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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