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Information for unigene UN34215
| FASTA Sequence |
| Unigene ID: UN34215 | Length: 1336 |
SSR | | TGAACAACTTCTAGTAACAATGGCTCTCCCGACATTTTACATGTATTTAGTTCATTCCATCTACCTTCGAAGTTAAATTTGTATCC
AATCATCATTATCCACCGTGCATCAAAAACACAATTGTCATCGCTTTGATTACACAATTGAGAGAATGTATATATGTGTACATAAA
CCACACCGTTTATCATCAAACCTGGAACAACAATGTAAAACAGCCTTCAGAGATTTGCAAAGTAAGAAAAAAAAAAACATTAATGA
CCATATCCATTTCCTTTTTTTTTCAGCCTAGTCTTCTAAGCAAATACTCCACTTGAACTTCTTTAGTCAAGGGCATGATCCAATCT
CCATACAAATGCCCCACCAAGATTGGGCTGATTTTGTAAACTTGAGATTCTTCTTCTTCTTCTTTCTCCTCCATCCTCCCCACTTT
CACTTCTTGCCCGTATGTTCTGGTTTTTATCTCAACTCTCTTCTTTATCGCCTCCTCCACAGTCAAGAATGTCAGCATATCCATCA
ACGCATCCTTATCCTGCAACGCGTTGCACACTAAAAGGTGAGATATGCATACATAAACTTTGAATGGTTTCTTATTCAGGTTTTGT
GAAAAGTAGTCAGTACTTGTGCTTTGATGGCGGACTCATATGCCTCGGGTGATGCTTGGAACTTGGCCTCAGCAACAAATTTACCG
TAATGGATCCTCTTTGACAGAGACTGCAATGAACATCACCAAAACTACTACATGATGAGTACTTACTTACAAAAAGAGCTAAAGAG
TCAAGTACAGAAAAGCAAAACCTGAAGGCAGATGGCATCACATACAGCTGTTGATCCGTAGTTACCATCATCACCTTTCTTCACTA
GTCTTGGCACAAGGTCTCTGAAGTACATGTTCCATATCTTGTTGTTTATGTTGATCGAATCAGCACCAAAATGCAATACCTATTTT
GATAAGAAACAAAAACTCAACCAGTTGCTTCGTACCAATAATAAGAAGTGACAACCATTAATAAAGATCATATAAGCACCTTTGGG
TAGTGAAGAGGTGGTAACAAAGGCTCTGGCAAATCGTCTGGGAAGAAAGGATGTTCATCAGGGCTCTTGTACCTACCTACCTTAAA
TCATCACCATAACAGAACAGAACCACCAAGATTCAATCTTTGCTTCTTAAAAGACCTATTAGAGGTTATGTTGTAACCTTAGCGTG
AAGCTTCTCGGTGCCTTTGAGCATGTACTCAACCAAAGAACCGTTGAAACCCTCCATGTCAAAAGCATTAGGATCGTAAGTATCCG
CGTTGTAACAGTACTTTGCTCTCTCCAACAGACCAAATATAATGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB01816 chorismate mutase precursor [Arabidopsis thaliana] | 253 | 2e-019 |
| NP_566846 chorismate mutase 1 [Arabidopsis thaliana] | 253 | 2e-019 |
| CAA81286 chorismate mutase precursor [Arabidopsis thaliana] | 253 | 2e-019 |
| XP_002877163 hypothetical protein ARALYDRAFT_484689 [Arabidopsis lyrata subsp. lyrata] | 253 | 2e-019 |
| CAB54518 chorismate mutase [Arabidopsis thaliana] | 246 | 1e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42738 Chorismate mutase, chloroplastic | 355 | 1e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29Q24 At3g29200 | 355 | 2e-031 |
| B9T3T6 Chorismate mutase, chloroplast, putative | 220 | 8e-016 |
| D0VBC0 Chorismate mutase 01 (Fragment) | 216 | 2e-015 |
| Q30CZ6 Putative chorismate mutase | 210 | 1e-014 |
| O22409 Plastidic chorismate mutase 1 (Fragment) | 209 | 2e-014 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G29200.1 CM1 (CHORISMATE MUTASE 1); L-ascorbate peroxidase/ chorismate mutase | 355 | 1e-033 |
| AT1G69370.1 CM3 (chorismate mutase 3); chorismate mutase | 224 | 1e-018 |
| AT5G10870.1 ATCM2 (chorismate mutase 2); chorismate mutase | 219 | 6e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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