Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN34290

FASTA Sequence
Unigene ID: UN34290Length: 1082 SSR 
GCAAAACAGAAAGAACTGAAATCTATAACTTCACAAACAAAACAAAAGTTAAATACAAAGTTCAGTTTCATGTATTTTCTTGTACA
ACTCTTTTCACACTTAGATTACAACTGATAAAGCCACATGCACCAACCAAACATTCCCAAACTCCCAACACAAGAAGAAGAAAACA
AAGCAAAACTAGTAAGATAGATAAACAGTGCACTGGAGAACAGTCTCAAGGCCATCAGTGAACTGATGCGGCTGCTGCTGCTGCAA
CCCGCTAGATCCTGTAAACGTCTTCACAATCGCAAATCCTCTCGCGTTCACATACTTCCCAGTACCTCCCATAACTCCTAAATGCG
ATTCCGAAGCCGCTGTTCTATGAACAACAAAGAAGCTTATACTATCTTCATAACCACCGCTCTCAAACATGGCAGTAAACGCCATC
GTCTGGCTAGTTCCATCAACCGCACTCGCCACATAGTACCCCTGCGCTTTTCCAAGCGAATGGGAGTTGAACCGCCTAGTATGTCG
TGCATAAAGAACACTAATGTGTGGTCAGGACCTACACCCACCACCACCACCACCAAGAGCTGGACCAGCACCTGCACCACCACCAA
GAGATGGACCAGCCCCTGCACCACCACCAAGAGCTTGGCCGGTGCTTACTCCAGGACCGGTGGCTGAACCAGCAACTGGTAAAGGG
CCGGGACCAGTGGCAGGCAAGGAACCTGGACCACCACCAACGGGTAAAGGACCAGGAACAGAGCCAGCGGTTGGTAGAGGACCTGA
ACCACTTGATGAGACTGGCCCTCTTCCTGCACCAAGACTCGTGGCAATAGGAACTGAACCACTTGATGGTACTGATCCTGTTCCTG
TTCCTGTTCCTGCACCGAAACCGGTTTCTGCAGAGCCTGAGCCAGACGCTGGTAAAGGCCCAGGGAAGGGACCTGATCCGGGGATG
GTTGTGGCTGGGGATGTATCTTCTTCATCAAGAAACCGAGCAGCAGCTGCGAAAGTAACAAAGAGAGCTACAACCAAGAATGAGAG
TATTTTTTTACCTGCCATTGAACAAGAAAGATGATCAGAGAAGAGAAGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_973782 disease resistance-responsive, dirigent domain-containing protein [Arabidopsis thaliana]4985e-048
NP_180435 Disease resistance-responsive (dirigent-like protein) family protein [Arabidopsis thaliana]4762e-045
NP_001154539 Disease resistance-responsive (dirigent-like protein) family protein [Arabidopsis thaliana]4762e-045
XP_002881003 hypothetical protein ARALYDRAFT_481780 [Arabidopsis lyrata subsp. lyrata]4762e-045
NP_001118404 uncharacterized protein [Arabidopsis thaliana]4053e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q95JC9 Basic proline-rich protein1935e-014
A4TCF8 Translation initiation factor IF-21901e-013
P03211 Epstein-Barr nuclear antigen 11882e-013
Q3KSS4 Epstein-Barr nuclear antigen 11882e-013
Q1HVF7 Epstein-Barr nuclear antigen 11829e-013

TrEMBL top hits (Blast detail)Scoree value
Q9LQQ0 F24B9.16 protein4983e-048
Q9SIA8 At2g286704761e-045
B3H4H9 Uncharacterized protein At2g28671.14052e-037
A5C2J8 Putative uncharacterized protein3075e-026
B9HTW8 Predicted protein3075e-026

Arabidopsis top hits (Blast detail)Scoree value
AT1G07730.2 disease resistance-responsive family protein4991e-050
AT2G28670.1 disease resistance-responsive family protein / fibroin-related4775e-048
AT2G28670.2 disease resistance-responsive family protein / fibroin-related4775e-048
AT2G28671.1 unknown protein4283e-042
AT3G55230.1 disease resistance-responsive family protein2312e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information