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Information for unigene UN34320
| FASTA Sequence |
| Unigene ID: UN34320 | Length: 690 |
SSR | | GCATAAGAGCTGATTTTTATAATAGATAAAAATTAGGGAGCCCATAATTTACAACGTTCCATGCTTCAGGCACCCAAGTAATTTTA
ATAATCTTCCATAAAAGAAAAAAAGCTATTCGAGTATACAAGTTACCAATTAACCCGGAACCACCTCTATGCCCTGCCTATTAAGT
AAACTAAATCACCCTCTGTGCTTTGCTTTGGTACCCTGCAGTGTGTACCAGACAAGGGCCAACCGATACTGAGGAGACTCAGCATA
TAAAGAAATAAATAGTTACTACCAATTCGAGTCTTGTCTGCACACCGAATCAAGGCTAACTCCTGCTGTCTGATATTCCTGTTGAT
TGTTCTGTGCATAGCATTAAGAATCAAAAGGAACACCGAATCATCCCGAGAGAGAGAGAAAACAAAACATGAAGAAATATCACTCA
GAATCTGAGTCAATGGAGAGGAACATCCGAGGTCTTACAGAACGCTTCTGCCGAGGAAATGAAAATGGGTTGTCTGATCTTTGTCT
CTTCGCCTTGTCGTCATTAATACCCAAAAGCAACGAAGCAGTATCTGTCGTAGTCAACATCTGCTGGCTTGAGTTGAGGCCATTTG
CAGAAGTAGCCTCTCCATGATTCCCACCACCAGCGCTATCGCCTAGCCTAAGCGAGATCCAGTCATCACTGCGGATACCATTTGAC
AT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200849 E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] | 341 | 4e-030 |
| NP_974969 E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] | 341 | 4e-030 |
| BAD94301 putative protein [Arabidopsis thaliana] | 341 | 4e-030 |
| BAH19443 AT5G60410 [Arabidopsis thaliana] | 341 | 4e-030 |
| XP_002864685 ATSIZ1/SIZ1 [Arabidopsis lyrata subsp. lyrata] | 335 | 2e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q680Q4 E3 SUMO-protein ligase SIZ1 | 275 | 8e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFC6 AT5G60410 protein (Fragment) | 341 | 2e-030 |
| B9SK46 Sumo ligase, putative | 302 | 8e-026 |
| A5B9J2 Putative uncharacterized protein | 275 | 1e-022 |
| Q2HSV7 DNA-binding SAP; Zinc finger, MIZ-type; Zinc finger, FYVE/PHD-type | 160 | 2e-009 |
| B9DG12 AT5G60410 protein | 149 | 5e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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