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Information for unigene UN34359
| FASTA Sequence |
| Unigene ID: UN34359 | Length: 803 |
SSR | | GCATCTTCTTATAGGGACCGTCGTGGATACTAAAATCTGTCATCCAACTGAATTCGATTTCTTTTTAAACAGCCACGCTGGCATTC
AGGTAACCAAGACTTTCCGCTGCTAGTGAAATTATCTTTAGCCCAGTCTTCATCGTTAGGAACTATAAGTTGCTTTTGTTTGGTTT
TAGGGAACAAGCAGGCCTGCACATTACCATGTGCTTGTGGACGAAAACGGTTTCACTGCCGATGGTTTACAAATGCTCACCAACAA
CCTTTGTTACACGTAAGGAACAACAACATGCATTTTGCCTTTGACATAATAATAATAATAGTAGAGACATTGTCTAAAAGATTGGT
CTCAAACCGCAGGTTTGCGAGGTGCACGAGATCTGTCTCGATTGTGCCACCGGCTTACTATGCCCACCTGGCTGCGTTCAGGGCTC
GTTACTACATGGAAAGTGAGACCTCTGATGGGGGTTCAAGCAAGAGCAGGAACACAACCGCAAGCACGAGTGCTGTTGTCTCGCGT
CTACCAGCCATCAAAGATAACGTCAAGGATGTTATGTTCTACTGTTGATGAAGCACCACTTTCTTGGCTACTACCAACCGAAAGGA
ATGATAAATAATGAACTCTCTACCTTTCGGTTTTGGTTTTTTTAACTCGTCTTTTGGGGTTTAGCTGTGAATACTTTGAATGATGC
GGCTAATATTTTCTCTCGGAACTATTATGCGTTTTGGAATCACGACGATGATCTGACTTCACGTTTGTCGTTGTGGAAGAAAGAAA
AGGTTTAACTATGGTTTTTCTTTAGACTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002862391 hypothetical protein ARALYDRAFT_920798 [Arabidopsis lyrata subsp. lyrata] | 312 | 1e-026 |
| XP_002880962 hypothetical protein ARALYDRAFT_481718 [Arabidopsis lyrata subsp. lyrata] | 312 | 1e-026 |
| CAE45021 argonaute-like protein [Arabidopsis halleri subsp. halleri] | 309 | 2e-026 |
| AAD21514 Argonaute (AGO1)-like protein [Arabidopsis thaliana] | 293 | 2e-024 |
| NP_850110 Argonaute family protein [Arabidopsis thaliana] | 293 | 2e-024 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SJK3 Argonaute-like protein At2g27880 | 293 | 8e-026 |
| Q5Z5B2 Protein argonaute 1D | 253 | 4e-021 |
| Q851R2 Protein argonaute MEL1 | 242 | 7e-020 |
| Q6K972 Protein argonaute 1C | 229 | 2e-018 |
| Q6Z4F1 Protein argonaute 14 | 223 | 1e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q70IH5 Argonaute-like protein (Fragment) | 309 | 2e-026 |
| B9SCN8 Eukaryotic translation initiation factor 2c, putative | 271 | 4e-022 |
| B9FR04 Putative uncharacterized protein | 253 | 5e-020 |
| B9RTJ1 Eukaryotic translation initiation factor 2c, putative | 243 | 8e-019 |
| B8ALC8 Putative uncharacterized protein | 242 | 1e-018 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G27880.1 AGO5 (ARGONAUTE 5); nucleic acid binding | 294 | 6e-027 |
| AT5G43810.1 ZLL (ZWILLE); translation initiation factor | 221 | 2e-018 |
| AT1G69440.1 AGO7 (ARGONAUTE7); nucleic acid binding | 185 | 2e-014 |
| AT1G48410.1 AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding | 178 | 2e-013 |
| AT1G48410.2 AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding | 178 | 2e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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