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Information for unigene UN34581
| FASTA Sequence |
| Unigene ID: UN34581 | Length: 1116 |
SSR | | GTTTATAAGAGTGATAAATCTTTAATAAATGATTTACAAAGGTTTATGGACCATTTTTAGAATTTATAAACCTTTTACAAATCATT
TAAGGGTTAACTTCAAATAACAGCTTCTGATTCATACTTCCTTTTCAAAGCCTCTAGTGCTATGTAATAATAAGCATCACCCATTA
TATCCTTGAACACATCTCCTGGCTTGTAGAAATCGGAGAGACCAAAGTCAATGGTTTTGAGAGGAGAGTTCTCATCTTCGTTCAGC
AACAGAAAGTTCTCAGGCTTCAAATCCCTGTGAATAGCCCCATGTCATGACAAGTAAGCACAATCTGAACAATGTTTCTCAAGGAG
ACAGTTCCGAGGTAAGGTCCGTGAGAGAGTGCAGGTCCATCAGATAGCGAATACACACAGATGAAGAGGAAAGAACTGAGGAGGGA
GACGAGAGGAATATCGGTGAGAGAGCTCTTGAAGCTGTAACGGCTGAGATGGTCGTTGAAGGTGTAGCAGGTCAAACAAGTAAAGC
ATGAAAAACAAGTCTTCAAGCATCTTCCCAATTTCTCCACAATTTTCCCCATTTCTTCCTTCCCCTAACCCCCACTATCCTAATCT
ATCCTCTAATTATTTGATTCCCAATGCGAGTCAAAATTGGAGATCGATTAAGACCGACCAAAATCAGATCCTTTGATTTTATGTTG
GTGTTGAGACCCTAGCGAGAAGAAAACACCAGCAATCCACCAAGTTCGGAGGATATTGTGAGGATGGTGATGACTTGGCCATCTGC
CGGCGGCGGGGAATTTTTCTGTCAAATTATAAAAAAAAAGGAAATCAAAAAGCCATTACGCTACTACGATTCTGAAAGGAAGGATC
AAAGCTTTTAAAGGGAATTTCAGAATCGCAGAGGAACGGCGAGAGAGAGAGAGAAAGAAATGGAGATTAGAGAAAGGGGAGAAGAC
ACTCCTTTTCGTCGGGAAAGTCGCAGGAGCATCATCGATCTTGTAATTGTTCATCGGAGCATCGTCGATCTCGTCGCCGGAATGTC
TTTGATATCGTCGGAATTGGTCACCGGAGAGAAGTCGTCGAACACCGAAGAGAAGGTCTTTGATATTAACGATGAGATTTGGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178144 alpha/beta-hydrolase-like protein [Arabidopsis thaliana] | 291 | 5e-024 |
| XP_002887837 hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] | 291 | 5e-024 |
| XP_002304165 predicted protein [Populus trichocarpa] | 269 | 2e-021 |
| XP_002299616 predicted protein [Populus trichocarpa] | 269 | 2e-021 |
| NP_196779 calcium-dependent protein kinase 17 [Arabidopsis thaliana] | 254 | 1e-019 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FMP5 Calcium-dependent protein kinase 17 | 254 | 4e-021 |
| Q3E9C0 Calcium-dependent protein kinase 34 | 246 | 4e-020 |
| Q42479 Calcium-dependent protein kinase 3 | 228 | 5e-018 |
| Q8W4I7 Calcium-dependent protein kinase 13 | 214 | 2e-016 |
| Q9SJ61 Calcium-dependent protein kinase 25 | 205 | 2e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C976 Putative uncharacterized protein At1g80280 | 291 | 4e-024 |
| B9GKZ4 Predicted protein | 269 | 1e-021 |
| B9GWN7 Predicted protein | 269 | 1e-021 |
| Q9XI20 F9L1.44 protein | 254 | 7e-020 |
| B9SJ93 Calcium-dependent protein kinase, putative | 251 | 2e-019 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G80280.1 hydrolase, alpha/beta fold family protein | 291 | 2e-026 |
| AT1G15490.1 hydrolase, alpha/beta fold family protein | 254 | 4e-022 |
| AT5G12180.1 CPK17; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | 254 | 4e-022 |
| AT5G19360.1 CPK34; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | 246 | 3e-021 |
| AT4G23650.1 CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | 228 | 4e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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