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Information for unigene UN34627
| FASTA Sequence |
| Unigene ID: UN34627 | Length: 887 |
SSR | | GTTCATCTTCTGATTTTGCTTCAGAATCTCATTGTCTTTGTTTTCTGTATCACTCCCGGTGCCTGTCTTGTCTGTCTGATTTTGCT
TCAGAATCTCATTGTCTTTGGTTTCTGTACCACTCCCGGTGCCTGTCTTGTTCGTCTGACTTTGCTGCAAAAGGTGGACATTGTCA
TTGCCCTCTGCATCATTCAATAGACATGTCTTGTTCATCTCACTTTGCTTGGAAAAGTCAGTGTCTTTGCTTTCTGTATCTGTCTT
GTTTGTCTCACTTCGACTCGAAAGATCATTGTCCTTGTTTTCTGAATCATCACTCCCTGCATCTGTGCTATTGGTATCTTCTTGCT
TCACAGACTTTTCTTGGTCTTCACTTTCCTCAGACGAGGTTATATCGTCGTTCGGACTCAGATCAGATGTACCATGAAGAGAATCA
GACTCTAGTAATGGCGGTGCATCATCGAAAGGCACAGCCGTCTCATCAAGATCAGGTAATCCAACAGAGTCAACATCTTTACCAGC
ATCTCCGTGGCTAATGAAGAAGGTGGAGAGGAAGAGAAGTAGCCAGAGGAGAAAAACAAGTGAGAGAGAGACTTTGTAGAAACTCT
TGTTCATCATCATCATCCCATTAGAAGAATTGTAGTCAGAAACTCTTCTTCTTCTTCTAGTTCTAGCCAGAAGAGTTTGCATTGGC
ACATCCACAAAGCCAAGAGAGGAGGAGGAGCAGCAGTAAACGCCCTGAGACGGAATCGAAGCAAGTATTCCTCTCTAGAGGATTAT
TCGGATAGGGTTCTCCGATTCGAAATCCGCCGCCGATTAGGATTCAATAGAGGAGATATGATGATCTGCGGGTAGTATCACTGACG
GCGACGAGGCGTAGACGGAAACAGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAC43121 unknown protein [Arabidopsis thaliana] | 457 | 2e-043 |
| NP_683323 Galactose-binding protein [Arabidopsis thaliana] | 457 | 2e-043 |
| XP_002890541 hypothetical protein ARALYDRAFT_335524 [Arabidopsis lyrata subsp. lyrata] | 393 | 5e-036 |
| AAB72170 hypothetical protein [Arabidopsis thaliana] | 324 | 5e-028 |
| AAN60245 unknown [Arabidopsis thaliana] | 291 | 4e-024 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9P785 LisH domain-containing protein C1711.05 | 131 | 6e-007 |
| Q99R07 Clumping factor B | 124 | 4e-006 |
| Q7A382 Clumping factor B | 124 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GX04 At1g22882 | 457 | 1e-043 |
| O23133 Putative uncharacterized protein F19G10.15 | 324 | 4e-028 |
| Q8H7G6 Putative uncharacterized protein (Fragment) | 291 | 2e-024 |
| Q0WQI7 Putative uncharacterized protein At1g71360 | 212 | 4e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G22882.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71360.1); Has 1862 Blast hits to 1619 proteins in 245 species: Archae - 32; Bacteria - 119; Metazoa - 736; Fungi - 195; Plants - 90; Viruses - 21; Other Eukaryotes - 669 (source: NCBI BLink). | 463 | 2e-046 |
| AT1G71360.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22882.1); Has 9785 Blast hits to 6992 proteins in 496 species: Archae - 108; Bacteria - 691; Metazoa - 4011; Fungi - 621; Plants - 261; Viruses - 70; Other Eukaryotes - 4023 (source: NCBI BLink). | 212 | 2e-017 |
| AT2G22795.1 unknown protein | 115 | 4e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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