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Information for unigene UN34660
| FASTA Sequence |
| Unigene ID: UN34660 | Length: 935 |
SSR | | ACTGTTCTTCTTCAACAATTTTTTTTAAAAAAAATTATTCAACAGTTGACACTTATACAACCAAATGTAATACTAATTTTATTCAA
AGGTTACTACCAAGTATCACCTGGTCAGGATACTCTTTAGCATTCCCTTTAGGATTCTCCTCAAACCTCCTCAGACTAAACTGCTT
CATCTCAACTCCTCCTCCAGCCTCTCCCTCCGTCGCCAGCTCCGCTAATATCCTCCCAACAGCAGGCGCCATCTTAAACCCATGAC
CGGAAAACCCGCCGCCGACCACCACATCTTTCCCAAACTCCCCACCAAGAAAGTCAATCACAAAGTCCTCATCTGGCGTCATTGAA
TACATACAAAGCTGAGTCGCCGTTCTTTAGCGCTAGCGTCTGGAACATAGACACGGCTTTGGTCGGTTTGATAACTCCTCCAAGGT
CTGTCGAGACTCCGATCCAGTTCTCCGGGATATTGATCCTGCCGGAGAAATATTCAGACACGGTCTTGGAGTCCATGACCCTGTGA
GCCAAGCCGTGTTTACGACACGTGGCGACAACAGAGAGGAGGCTCTGCCGGTCCTTAGGGCCCATGTCGAAGTGATGAGTTGGGAA
ATGGACTTTGTATCCGATCTCGGACTGGGCCTGGGCCCATAGCTGAGCTGACTCGGACACCATGGTGTAGTAGTAATCCTCCGGGT
AAGTGGCACGTATGGTGCGTGACTCGCCGTGGGATGAGCCACGGTGGTGGAGGAAGTCGAATTGCTCGAGGAGGAGAGTCTTGTGT
CCTCTTTTCGCTAGCTGGTACGCTGCGGAGCTTCCCATAACTCCTGCTCCGACGATGATCACGTCGAATCGGTGGTCGCCGGAATA
TTCCATGAGGAATGTTAGTGAGAGAAACAAAGAAAGAAAGAAAGAAAGAGAGAGGGTTGATTGAAGGTCGGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880597 sarcosine oxidase family protein [Arabidopsis lyrata subsp. lyrata] | 773 | 5e-080 |
| NP_180034 putative sarcosine oxidase [Arabidopsis thaliana] | 771 | 9e-080 |
| XP_002324381 sarcosine oxidase [Populus trichocarpa] | 644 | 5e-065 |
| XP_002535101 sarcosine oxidase, putative [Ricinus communis] | 626 | 6e-063 |
| XP_002272090 PREDICTED: hypothetical protein [Vitis vinifera] | 618 | 5e-062 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SJA7 Probable sarcosine oxidase | 771 | 4e-081 |
| Q9D826 Peroxisomal sarcosine oxidase | 288 | 4e-025 |
| Q29RU9 Peroxisomal sarcosine oxidase | 285 | 9e-025 |
| Q9P0Z9 Peroxisomal sarcosine oxidase | 283 | 1e-024 |
| P79371 Peroxisomal sarcosine oxidase | 275 | 1e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q53YK5 Peroxisomal sarcosine/pipecolate oxidase | 771 | 6e-080 |
| B9ILE2 Sarcosine oxidase | 644 | 3e-065 |
| B9TA32 Sarcosine oxidase, putative | 626 | 4e-063 |
| B9N674 Sarcosine oxidase | 617 | 4e-062 |
| A9NVP0 Putative uncharacterized protein | 489 | 3e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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