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Information for unigene UN34706
| FASTA Sequence |
| Unigene ID: UN34706 | Length: 910 |
SSR | | AAATGGAGGCAGAAAATTACTCTACCCTTGCAGATTAACTCTCATAAACATATGCATTTACCCCCTCTGGGGGGAGAAATCAAATC
AAATCAAGGAGCAGCAGCAGCAGCAGAAGGAATCATGCCAGCTTTCCTAGCATAAGCAAAGAACCCACCAGCGTCAATCACCGGCC
CAGCGTCACCAATAGGCTTCAGCTTATACTCCTTCCCGGACGTATGATTAATCAAAACACTATCCCCTTCCCTCAACTCCACCGTC
GCCACGTCACCCGTCCTACACTCATCGCAAACCCTAACCTCCGAATCAAGCGGATAAACCTCCCCCGTCGCCACCGAGTTCCTGAA
AAAGATCCTCGCGTACGACTGCGCCACAACCGCCTTCGCCCCCGCCGCCCCCAAGCACACCGGCGCGTGCTCGCGAGACGAGCCGC
ACCCGAAGTTCTCCCCGCCGATGATGATCGAGTACTTCGTCTTCGTCTCCCCGGGCTCGACGAACCGGTCCGAGTAGGAGGTAGGG
AGACCGATAAGGGCGTAGGAGCCGAGTTTCTCGTACTCGTCGGGGTTGGAGGGGACGAGGGTGAGGTACTCCGCGGGGATGATCTG
GTCCGTGTCGATGTTGTCGCCGACGACGTAGCAGAGGCCGTGGAAGGTTTTTCTCTCCTGCGGCTCGGCGGCGGAGCGGGTGGTGA
AGGAGGAGGAGCGGGAGACGAGGGGTTTGGGAGTGAGAGGGGAGTTGAATCTGAGGAAGGGAGATCGGAAGGGAGGAGAGGTGTTG
GGAGAAGATAGGGTTTGGGGGAATGTAGGTTTTAGGGATTGCAGAGAAGAAGCCGCCATGGTTTGGTGTTTGGTGTGGAGGAAGAC
GGAGTCAGAAAATGTTCAATGAGAAACGACTATAAGCGGAGTTTTCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181837 Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] | 1039 | 7e-111 |
| XP_002880023 aconitase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1038 | 9e-111 |
| XP_002878250 aconitase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 844 | 3e-088 |
| ACF17659 putative 3-isopropylmalate dehydrogenase small subunit [Capsicum annuum] | 817 | 4e-085 |
| XP_002530662 3-isopropylmalate dehydratase, putative [Ricinus communis] | 815 | 6e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B5YHE5 3-isopropylmalate dehydratase small subunit | 279 | 4e-024 |
| Q9UZ06 3-isopropylmalate dehydratase small subunit 1 | 261 | 5e-022 |
| Q9WZ25 3-isopropylmalate dehydratase small subunit 2 | 253 | 4e-021 |
| Q8TX94 3-isopropylmalate dehydratase small subunit 1 | 252 | 6e-021 |
| Q58673 Isopropylmalate/citramalate isomerase small subunit | 250 | 1e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZW85 3-isopropylmalate dehydratase, small subunit | 1039 | 5e-111 |
| B5LAV2 Putative 3-isopropylmalate dehydrogenase small subunit | 817 | 3e-085 |
| B9SXE3 3-isopropylmalate dehydratase, putative | 815 | 4e-085 |
| Q9LYT7 3-isopropylmalate dehydratase-like protein (Small subunit) | 803 | 1e-083 |
| A5B9M3 Putative uncharacterized protein | 799 | 3e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G43090.1 aconitase C-terminal domain-containing protein | 1039 | 3e-113 |
| AT3G58990.1 aconitase C-terminal domain-containing protein | 831 | 4e-089 |
| AT2G43100.1 aconitase C-terminal domain-containing protein | 727 | 4e-077 |
| AT1G62760.1 invertase/pectin methylesterase inhibitor family protein | 146 | 1e-009 |
| AT1G44191.1 Encodes a ECA1 gametogenesis related family protein | 145 | 1e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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