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Information for unigene UN34892
| FASTA Sequence |
| Unigene ID: UN34892 | Length: 774 |
SSR | | AATACACTTCATTGTTCTTTGTCTCTTTATATAAACTCAGTTTACATTTTTAATTTTCTTTAAGATAAAAGAAACAAACCCCAAAT
TAGGAAAGGGTGAAATTAAAAACTATAGCAACAATCAAAATAGTAAAAAAAAGAAGTAAATAAAAGCTTTGAACAAATAAGTTTTC
CTCTTTCTAAAAACTCTCATTCTGCAAATATAACCAATTCCTGTAAATCTCCATAGGATTTTCTCACACTTCTCTAAGCTGCAATA
CCTCCGTTTGGTTGCCTGTTGATGTATCCAGCTGGTCCTTTAGACATGAAGTCAAATGCTCCCATTCCCAATCTTTCCTCCGCCTT
TCCAGGCAACGAAGAAAGCCACGCCGAGTCACTGTACAGAGAGTCTGCCTCCAAGCTGCTTGAGCCGCCACTGCTGCTGTAACCAC
CAACATGAACCCCTCTCATTGCTTCTAATCCTACACCTCCTCCTCCTCCCTCACTGCGATAGCCACCACTACGTGAACGTCCAAAG
CTGTCCCCAATGCTGCCTAGTGAAGACATTCCAGAGTTTCCGTTAAAGCTGCTCCTAGATATCAGAGAGTTTGACATGTAACCTAG
ACCACCACCACCACCATTTCCCCATAAGTTGTTCTTGGCTGCTGCATTTAGCACAGAACCGTTACCTCCTCCAGACTCAATCTGGC
TACCGTACCTTCCAGCATATCCTGGGCTAAAGGGCCGTCCAAAGCCTGCATTGGAACCAGACCCTCCATAGCTCTGAGTCTGCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863329 predicted protein [Arabidopsis lyrata subsp. lyrata] | 633 | 6e-064 |
| ABD64965 hypothetical protein 25.t00002 [Brassica oleracea] | 631 | 1e-063 |
| AAM63044 RNA-binding protein-like [Arabidopsis thaliana] | 631 | 1e-063 |
| NP_568685 RNA recognition motif-containing protein [Arabidopsis thaliana] | 628 | 2e-063 |
| NP_974899 RNA recognition motif-containing protein [Arabidopsis thaliana] | 628 | 2e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9JIL3 Interleukin enhancer-binding factor 3 | 142 | 2e-008 |
| P35527 Keratin, type I cytoskeletal 9 | 142 | 2e-008 |
| P09789 Glycine-rich cell wall structural protein 1 | 136 | 1e-007 |
| P0A689 Uncharacterized PE-PGRS family protein PE_PGRS36 | 135 | 2e-007 |
| P0A688 Uncharacterized PE-PGRS family protein PE_PGRS36 | 135 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9U4 Putative uncharacterized protein | 631 | 7e-064 |
| Q8LDS6 RNA-binding protein-like | 631 | 7e-064 |
| Q3E8F2 Putative uncharacterized protein At5g47620.3 | 628 | 2e-063 |
| Q8VZ63 Putative RNA-binding protein | 628 | 2e-063 |
| Q2A9U7 RNA recognition motif. (A.k.a. RRM, RBD, or RNP domain) containing protein | 499 | 1e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G47620.1 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 629 | 8e-066 |
| AT5G47620.2 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 629 | 8e-066 |
| AT5G47620.3 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 629 | 8e-066 |
| AT5G46730.2 glycine-rich protein | 152 | 2e-010 |
| AT2G36120.1 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1) | 137 | 9e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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