Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN34916

FASTA Sequence
Unigene ID: UN34916Length: 637 SSR 
AAATCCTCTATGGCTCGGTGTTCTTTTCGTCGCATACCTTGTTTCCAAAGCCTTGTGGGTGCAGTTAAATATCTCAGGAGAGTTCA
GCAATGGAGCGCTACCTGGACTCCTTTCTTTGTCAACCAAGTTCCTTCCAACGGTCATGAACCTCCTTAAGAAACTCGCTGAAGAA
GGACAAGCTCCATCCACAAATACCAACCAGAGTTCTATGAACTCCTCAGCTCAATCCGAAGTTACAACTAATGGAGAAAGCAGCAG
CAGCAGCTCTGGTTCGTCTCCAGCGAAACTCGTTTCATAGAACAAAGAACTAGATAAGCTTAAGCTGTTGTTTGTCCGAGAGCCCA
CGAACCTAGAAACTTTTAAATTTCCTTACCCTTACAAAAGGGTAGCTCTCAGTTTTGGTGTTTGATCAGAGGGATTCACCGAGAGC
CATACGTTTATGTCTCCGAAGGCATTGGTTCCCTCTTGCAGGTGCCAAAGCCGTCGTCTTGTATGTTCCTAGACAAAGATTCTGAT
GCAGACAGAAGCATAGTCATGCTTTGTTTGCGAGTTATGTATTAATGTGGTTTATTGTATCTGAAGAAAGAATGTGAAACTTAAGA
TTGGTTTGTTGATTGAAGAGAGTTTCAGTTACAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188003 Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis thaliana]4077e-038
NP_974308 Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis thaliana]4077e-038
BAF02124 root hair defective 3 [Arabidopsis thaliana]4077e-038
XP_002884994 hypothetical protein ARALYDRAFT_478791 [Arabidopsis lyrata subsp. lyrata]4032e-037
XP_002327435 predicted protein [Populus trichocarpa]2875e-024

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
P93042 Putative uncharacterized protein At3g138704075e-038
Q0WL83 Root hair defective 3 (Fragment)4075e-038
Q3EB66 Putative uncharacterized protein At3g13870.24075e-038
B9MWS5 Predicted protein2874e-024
B9SN36 Protein SEY1, putative2848e-024

Arabidopsis top hits (Blast detail)Scoree value
AT3G13870.2 RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding4073e-040
AT3G13870.1 RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding4073e-040
AT1G72960.1 root hair defective 3 GTP-binding (RHD3) family protein2514e-022
AT5G45160.1 root hair defective 3 GTP-binding (RHD3) family protein2112e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information