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Information for unigene UN35017
| FASTA Sequence |
| Unigene ID: UN35017 | Length: 758 |
SSR | | GGAGCGATGGTTACCAAGTTCGGTATGAGCAAAGAGGTTGGTCTCGTGGCGCATAACTATGATGATAACGGGAAAAGCATGAGCAC
CGAGACGAGGCTTCTCATCGAGAGGGAAGTGAAGCTTCTTCTAGAAAAGGCTTATAACAATGCGAGGAACATCCTCACGGTTTACA
ACAAGGAGCTGCATGCGCTTGCTAACGCTTTGCTTCAGAAGGAGACTATGTCTGGGAAGCAGATTAAGGAGCTGCTCGCTGATCTC
AACGCTCCTCAGATGAAAAGGCGGCAGGAGGTTGTTGCACAGCAAAGCCAGCCTGTTCCTCCTCCTCCTCCATCAACTCCTAGCTC
TGCTGCTTCGTCAGCAGCCGCAGCGGCTGCTGCTGCGGCTTCGGCCGCCGCCTCGGCTGCTGCAACGGCCGCAACCAAAGGTAAAG
ACATGGCTCCTGTCGGGTCTTAAAATAAAGTAAAGGAGGCTCGTGTATGTGTATGCTGGGGGTAATTTAATTGGGAATAAACTCTT
TGTTTTGAGAGTATTTTAGAATCAGTGGAGGGAGGCTTGGCTGGTGAGAGATTAAAAATATTCAGTTTTTTTTTTTACTAATGTCT
TTATTCCACACTGAACCTCGCTACAGAGTGGTCTTTGTATTTTCTCTCTCGTTTGTCTTTTTAATGTATTCGGAAACTTGTGGGAG
GCTTCTCAGAAGTTTTGGCTCGTACTGTTTCAGGTTACAACATAACTATAAAGAACATGCTTTTGTAGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33733 unnamed protein product [Thellungiella halophila] | 601 | 3e-060 |
| XP_002880747 hypothetical protein ARALYDRAFT_481469 [Arabidopsis lyrata subsp. lyrata] | 591 | 4e-059 |
| NP_565616 cell division protease ftsH-4 [Arabidopsis thaliana] | 576 | 2e-057 |
| XP_002516427 Protein YME1, putative [Ricinus communis] | 462 | 4e-044 |
| XP_002279005 PREDICTED: similar to ftsH-like protease [Vitis vinifera] | 459 | 9e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O80983 Cell division protease ftsH homolog 4, mitochondrial | 591 | 2e-060 |
| Q8LQJ8 Cell division protease ftsH homolog 5, mitochondrial | 394 | 1e-037 |
| Q8LQJ9 Cell division protease ftsH homolog 4, mitochondrial | 382 | 4e-036 |
| Q9ZEA2 Cell division protease ftsH homolog | 144 | 1e-008 |
| Q68XR9 Cell division protease ftsH homolog | 141 | 3e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RRQ8 Protein YME1, putative | 462 | 3e-044 |
| B9HDE2 Predicted protein | 449 | 9e-043 |
| Q84LQ3 Putative FtsH protease | 440 | 1e-041 |
| B8LM83 Putative uncharacterized protein | 413 | 1e-038 |
| B8AAS6 Putative uncharacterized protein | 394 | 2e-036 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G26140.1 ftsh4 (FtsH protease 4); ATP-dependent peptidase/ ATPase/ metallopeptidase | 591 | 2e-061 |
| AT5G53170.1 FTSH11 (FtsH protease 11); ATP-dependent peptidase/ ATPase/ metallopeptidase | 124 | 3e-007 |
| AT1G50250.1 FTSH1 (FtsH protease 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | 114 | 4e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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