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Information for unigene UN35242
| FASTA Sequence |
| Unigene ID: UN35242 | Length: 953 |
SSR | | GAGGTAAACGATGTGCCTTTCAAGGAAACGATCCTTGCTCCAAGAGTGTTCATGGAGGTACTAATTTCTGTGTGGCTCATGGCGGT
GGAAAGAGATGTGCGGTTCCTGAATGCACTAAGAGCGCTAGAGGGAGGACTGACTTCTGTGTCAGACACGGTGGAGGGAAGAGGTG
CATGTCTGAAGGATGCGGGAAAAGCGCGCAAGGCAGTACTGACTTTTGCAAGGCGCATGGAGGAGGGAAGCGTTGTGCGTGGGGTC
ATCCCGAGACTGAGTACGCGGGTCAATCTTCTTCTGGTCCTTGTAGTTCGTTTGCTAGAGGTAAGACTGGTCTCTGTGCGCTTCAT
AACAGTCTGGTTGAGGATAACCGGGTTCACGGAGGAATGACTGTAACTTCGGAGAGCCAAGAACCGAGACGAAGCAGCAGCGAGAC
AGAGAACGAGGAAGAGTTTAGTGGCTCTCAAGACGTGATGAACATGGATAGGATGAAAGGGAGAAGCGCTGTTGGGTCTCCAGAGA
CTGATATTGATCTCAATGAGAATGAAAGAGGATTGGGGTTGGCTCCAGAAGGAAGAGTCCATGGTGGAAGTTTGATAATGGCCATG
TTGGCTGGTAGAGAGGGTGGCTCTGGCTCAGGTTCTGGTTCAAGAAACCTGCCTAAGGGGTGGATGTAAGTTAATATTGTCTTCAG
TTTGCTTCCGGTCTTAATTCTGCACGTGTGGAGTAGTATGTTGGCACGTGATAGTGAAGGTGTTACGAGTCTTGTGTTTGTTCTTG
TTTAGGTTTGTGCTTAGAGACTACAAAAGGGATCAAAGTCTCTATTCTCTGTCTTATTTGCCTGTAGATATTGAATTTATGGGTTC
ACGCAAGGTTATTGTGAATTGTCAAAACAGTCTGTCTTATGATGACGATGATGATGATGATGATGATGAGAATAAAGTCATGTCTT
TGTTTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176596 uncharacterized protein [Arabidopsis thaliana] | 1047 | 9e-112 |
| BAD43515 hypothetical protein [Arabidopsis thaliana] | 1044 | 2e-111 |
| XP_002886362 hypothetical protein ARALYDRAFT_474940 [Arabidopsis lyrata subsp. lyrata] | 1040 | 6e-111 |
| XP_002509888 transcription factor, putative [Ricinus communis] | 645 | 4e-065 |
| XP_002297999 predicted protein [Populus trichocarpa] | 641 | 1e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZ67 Probable WRKY transcription factor 19 | 309 | 1e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SH64 F22C12.10 | 1047 | 6e-112 |
| Q680W5 Putative uncharacterized protein At1g64140 | 1044 | 1e-111 |
| B9RCK4 Transcription factor, putative | 645 | 3e-065 |
| B9GKB3 Predicted protein (Fragment) | 641 | 7e-065 |
| A9PJL2 Putative uncharacterized protein | 635 | 4e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G64140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 2298 Blast hits to 1429 proteins in 121 species: Archae - 0; Bacteria - 42; Metazoa - 1626; Fungi - 29; Plants - 243; Viruses - 9; Other Eukaryotes - 349 (source: NCBI BLink). | 1047 | 4e-114 |
| AT5G64550.1 loricrin-related | 410 | 3e-040 |
| AT5G09670.2 loricrin-related | 404 | 1e-039 |
| AT5G09670.1 loricrin-related | 404 | 1e-039 |
| AT4G12020.1 WRKY19; transcription factor | 309 | 1e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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