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Information for unigene UN35271

FASTA Sequence
Unigene ID: UN35271Length: 683 SSR 
GATCATAAAAGTCTTAAAAGACAGTCTGTTAATATTATTTCCAGTAGAGATGCCCTAACTAAACGGTAGATCACATTAATTCTAAT
TCTATAGGGTTTGATTAAAATCACAAACCAAACTCTCTCTCTCTCATAAGAAGCTTTCATCATTCACTGATCCCTCCCACGAGTTC
CTTGACTTGAGCAGAGCTGCTTGGCTTGGATTCACCTCTCTCTTTCAAGATGCTTGACTTGAACTGCTTTTCATCGTGAACGTTCA
GATCCTCAACGTAGTCAACAAAGACACGAACCCTCCCACGAGTCCCAATCGCTCCAGCTTATCTCCAAACCCTTGCACCTGAACGC
TTCTGAGAGTGTTCTTCTCCGGATCAAAGAAGAAGACGTGATAAACCTTCGCAGTGTAGTCCATAGCCAAAACAATCTCACCTCCC
TCAGTCATCCCGGCAACAGAGAAATTGCAACGGCGAACAATCTTCTCCTCAGACAAAACGTAAACAGACTTCACCCACTCTTTCAT
CTCGACAACATCTTCAAGAACCCACAAAGACAACTCAAGAACAATCTTCTCATCATCATCACCTTTAACATACTTCCAGTAAACAC
CAGCTAATTTCCCCTTGCAGTTAATCAAGTTAACAGCCTCTTGGCCAGCAAAGCAATCAGCTTCGATGAACTCAAACTCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878163 F-box family protein [Arabidopsis lyrata subsp. lyrata]3469e-031
Q9SVX4 RecName: Full=F-box protein At3g575903217e-028
NP_191318 F-box and associated interaction domain-containing protein [Arabidopsis thaliana]3217e-028
NP_191248 F-box associated ubiquitination effector family protein [Arabidopsis thaliana]3073e-026
XP_002875716 hypothetical protein ARALYDRAFT_905663 [Arabidopsis lyrata subsp. lyrata]3039e-026

Swiss-Prot top hits (Blast detail)Scoree value
Q9SVX4 F-box protein At3g575903213e-029
Q9MAP1 Putative F-box protein At1g330202471e-020
Q9MAP2 Putative F-box protein At1g330102246e-018
Q9FIH4 Putative F-box protein At5g424302202e-017
Q9ZQF0 F-box protein At2g156401986e-015

TrEMBL top hits (Blast detail)Scoree value
Q9LER9 Putative uncharacterized protein T8M16_2203072e-026
Q6ICX6 At3g575802732e-022
Q9SVX3 Putative uncharacterized protein F15B8.2302732e-022
Q1PEE7 F-box family protein-like protein2722e-022
A0MEH8 Putative uncharacterized protein (Fragment)1827e-012

Arabidopsis top hits (Blast detail)Scoree value
AT3G57590.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated type 3 (InterPro:IPR013187), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G57580.1); Has 891 Blast hits to 856 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 889; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).3213e-030
AT3G56890.1 F-box family protein-related3071e-028
AT3G57580.1 F-box family protein2731e-024
AT1G33020.1 F-box family protein2471e-021
AT1G33010.1 F-box family protein2246e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

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