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Information for unigene UN35276

FASTA Sequence
Unigene ID: UN35276Length: 855 SSR 
GGGAGAGCAACATCTTCGTAAAAAAAACAGAGCAACGTCTTCATAAAAAAAAAAGAAATTTCAAAAAAAACAGAGAAGGATCCAGA
GAGAGAGAGAGAGAGATGGGAGAAGTGGTTATAAACATTGATGAGACGAAGAGTTCGAAACAGAGAATATCGCGTTGCAGAATCTG
CCATGAAGAAGAAGCAGAAAGTTTCTTCGAAGTTCCTTGTGCTTGCTCTGGAACCGTTAAGTTCGCACACAGAGATTGCATACAAC
GTTGGTGTAATGAAAAGGGAAACACCACTTGTGAAATCTGTCTCCTGGTGTACAGACATGGGTATACAGCAATTCCAAAACCATCC
AAGATGATCGAAGAAGAAGAAGTCATGATCAGAGAAGGTGGAGGAAGGAGAAGAAGAAGAAGATTAGTGTCTATAACTGAATCAGA
CTTTACTCAATGTAACTCTGTTGCTACTTTCTTCAGATCATTAACCCTCACTCTAGCAGTGTTGTTGTTGATGAAACATACATTCG
ATGTAATTTATGGAACGGAAGAGTATCCATTCACTGTATTCACGGTACTAACATTAAAAGCCATTGGAATTCTCTTGCCAATGTTC
ACTATCATTCAAACAATTTCAGCTATTCAGAAAACTATCCGTCGTCGTCAGCAATATCACGATTCTGAGGAAGATACGTTGAGCTC
ATCCGACGACGAAGATGAGTTGGAAGATGATGAAGAGCAACAACAACATTCGGCATAAACACGCATATTAGGGAGATTAACTATTC
TTTTTTATTTTGTTCTAATTCATTTTCTTTCTTTCTTAACGAAAAGCATCTGTTCGATGCTCATTGTACAATCAGTTGCAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567222 protein pitchoun 1 [Arabidopsis thaliana]8192e-085
XP_002872858 hypothetical protein ARALYDRAFT_490373 [Arabidopsis lyrata subsp. lyrata]7905e-082
AAG10626 Unknown protein [Arabidopsis thaliana]6768e-069
NP_171761 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]6678e-068
XP_002892113 predicted protein [Arabidopsis lyrata subsp. lyrata]6525e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q86YJ5 E3 ubiquitin-protein ligase MARCH91361e-007
Q3TZ87 E3 ubiquitin-protein ligase MARCH91361e-007
Q0P496 E3 ubiquitin-protein ligase MARCH41342e-007
Q0IH10 E3 ubiquitin-protein ligase MARCH31333e-007
Q32L65 E3 ubiquitin-protein ligase MARCH21324e-007

TrEMBL top hits (Blast detail)Scoree value
Q9XF50 At4g020758191e-085
Q9FWY0 T14P4.10 protein6765e-069
B7FL62 Putative uncharacterized protein4606e-044
Q6NKQ5 At2g012753388e-030
C6T3F3 Putative uncharacterized protein3281e-028

Arabidopsis top hits (Blast detail)Scoree value
AT4G02075.1 PIT1 (pitchoun 1); protein binding / zinc ion binding8206e-088
AT2G01275.1 zinc finger (C3HC4-type RING finger) family protein3385e-032
AT2G01275.2 zinc finger (C3HC4-type RING finger) family protein3385e-032
AT1G02610.1 zinc finger (C3HC4-type RING finger) family protein2921e-026
AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein2453e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information