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Information for unigene UN35285
| FASTA Sequence |
| Unigene ID: UN35285 | Length: 1276 |
SSR | | GATGAAGAGAAAGGAGGAAGAATGAAAGAGGTAGTGCTTTGTTCTGGAGAAGCCAAGTCCAAAGATATCATTGAGGTGAAAGTCAT
GAGTTCTCAAGAAGTTATTACACCAGCACAAGAATCTGCATGTCATGGCTCTCCAGAGAGAGGATGAAGAGGTGAAAGAAGTAGCA
ATAGAGTTTGCAAATGATTGGGATGAAAAAGAAGTTGAAGAAGAAGAAGAAGATGATGATGATGACTATGAAGATTATGGAGATTT
TGATGATTACATTGGAGAAATCTCAACTGATTGGATCTACGATGTATCGAGGCCTCGAAGTTACTGGGAAGGGTTAAGGAAAGAAA
GGTATCTTGAGGTTCTCAACACTGAATCAGATAAAAAGGACATATGTAACCTTATTCAGAGCCGAACAGTTTCCAACTTCTTGACG
AGTGACTTGCGACAAAAAATCGATAATTTGATGACCAGTATCGTGCAAAATCACTTAAGCGTACCAATCAATCAAGAAGAAGGTGA
AGATGACAAAGAAGAAGAAGAAGAAGAGTGGGTTGAAGAGTGCTCAGCAAGGGACCAAGAAGATAACGAAACAGAGGAAAAACCAG
AGAAGACAAATCTTGAAGCTGCAAGCGACACAATTCTTGAAGCTGATCTTGACGCTTGCAGCCAATCATCAGAAAGGAGTAGTACG
TTGATGATCTCGTGGAGTTTCAGGGATCAAGATATTGACAAGGATCACGAACCGACAACGTCTTTATCTCTGCCTGAGCCTTCATC
TGCCACAAGTCAAACTACGCAGGAAATGCAGATGATAAGTGATCTCAGGGAACAAATGGAGCAGCTTCAACGAGAAATGCAAGAAC
TGCGAAACACCGTTAAATCTTGCACCGATATGCAACTTCATTTCCAGAAATCTGCGACTCAAGATTCTTGTCGCTCTGGCTCCTCC
GCAGAACAACGAGTAGAAAGTAAGAATCTGTTAAGACGCAAGTGCTGCGGTTGCTCTGAGATGCCTGTTGACTCGCTTCTGTATAG
GTGTGGGCATATGTGCGCGTGTCTGAAATGTGCTCATGAATTGCAATGGAGCAGTAAGAAGTGTCCGATTTGTATGGCCCCAATCG
TCGACGTTGTGAGAGCTTTTCTTGATGCTTAGGATTAGTAAAAAACAAGAAGATCAATATTATTTTCTCTATTGGTTTGGAATCTG
AATATACCTGATAACATTTGTTTGCCTTGTTGTTCTGCCATGTTGAGATCATTACAATAACACAGTTCCGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193749 uncharacterized protein [Arabidopsis thaliana] | 1028 | 2e-109 |
| CBI27383 unnamed protein product [Vitis vinifera] | 361 | 5e-032 |
| XP_002530118 ubiquitin-protein ligase, putative [Ricinus communis] | 348 | 2e-030 |
| XP_002303718 predicted protein [Populus trichocarpa] | 341 | 1e-029 |
| XP_002264993 PREDICTED: hypothetical protein [Vitis vinifera] | 340 | 1e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q24746 Protein neuralized | 149 | 8e-009 |
| P29503 Protein neuralized | 143 | 4e-008 |
| A8MQ27 E3 ubiquitin-protein ligase NEURL1B | 125 | 5e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O65430 Glu-rich protein | 1028 | 2e-109 |
| B9SVU9 Ubiquitin-protein ligase, putative | 348 | 1e-030 |
| B9GYH4 Predicted protein | 341 | 7e-030 |
| A9P8M8 Putative uncharacterized protein | 325 | 5e-028 |
| Q6NQ80 At1g30860 | 307 | 6e-026 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G20160.1 LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT1G30860.1); Has 56595 Blast hits to 33217 proteins in 1313 species: Archae - 191; Bacteria - 4343; Metazoa - 25320; Fungi - 4691; Plants - 1995; Viruses - 268; Other Eukaryotes - 19787 (source: NCBI BLink). | 1028 | 8e-112 |
| AT1G30860.1 protein binding / zinc ion binding | 307 | 3e-028 |
| AT2G34920.1 EDA18 (embryo sac development arrest 18); protein binding / zinc ion binding | 283 | 2e-025 |
| AT5G44690.1 unknown protein | 261 | 7e-023 |
| AT5G04460.1 protein binding / zinc ion binding | 205 | 2e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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