 |
Information for unigene UN35295
| FASTA Sequence |
| Unigene ID: UN35295 | Length: 741 |
SSR | | TTTTTCTCAAGCGAAGAGGTATCGCAAGAGAGGGCAAAAAGCACTAAAGGGGTTCTCTCCGCCGCCGCCGTCAAATCTCGCCGGAG
ATCTGCCGCCGTTTCCTAATCCGCCGAAGTCTTGTATCGTAACCCTCGATTAGGGTTTCCGATTTCGAAATCGAAAGAAATCAATT
GGGGGGAGGTTTTGCGCATCTCCTTTCCGCCTCTCTCTCTCACCGCGTATCCTCTCCTCGTCTCTCTCTCTCACAGCGTCTCCTCT
CCACGTCTCTCTCTTTTCGCCGCATCTCTTATCCGTCTCTCTCTCTCCGCCGGGTCTCGTCTCCGTCTCTCTCTCTCCGCCGCGTC
TCCTCTCCGTCTCTCTCTCACCGCGTCTCCTCTTCGCGTCTCTTTCTCGCACCGCAGCTCACTCTCCTCCTCTCTCTCTCAAGTGG
TCATATTCAGATACAACTTCCATTTTCAATGACCTCTGTCCCTGGAACTGATGAAGTACAGTTTGTGAGACTTATCTTCTTATATG
AGAATCAACTTTTGGTTTGGTGAAGTAGAGGATACTGTTTGGTGAAGTAAAAGCTTGCTGTGATGTTTGGTGTAGTAGAAGCTTGC
TGTTTTTTTAAACTTTATATCACATTATGTTACGTGGGTTTTCATTTTTTAGATTTAAATATCTTGAAACTTTATATCACATTATG
TTAATATGTGGATTCTCATCTTCTAGAATTAAATACTTTGAAACTTTATTACG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| EGW00777 Vomeronasal type-1 receptor 4 [Cricetulus griseus] | 153 | 3e-008 |
| XP_612879 PREDICTED: zinc finger CCCH-type containing 13 isoform 1 [Bos taurus] | 143 | 4e-007 |
| NP_956816 zinc finger CCCH domain-containing protein 13 [Danio rerio] | 138 | 1e-006 |
| EGS18762 hypothetical protein CTHT_0053710 [Chaetomium thermophilum var. thermophilum DSM 1495] | 135 | 3e-006 |
| CAG06679 unnamed protein product [Tetraodon nigroviridis] | 134 | 4e-006 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5T200 Zinc finger CCCH domain-containing protein 13 | 130 | 6e-007 |
| P49756 RNA-binding protein 25 | 124 | 3e-006 |
| B2RY56 RNA-binding protein 25 | 123 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B0S5D8 Novel protein (Zgc:66359) | 138 | 1e-006 |
| D2H0K3 Putative uncharacterized protein (Fragment) | 135 | 2e-006 |
| B9PQK0 Putative uncharacterized protein | 135 | 2e-006 |
| B9QLV5 cAMP-dependent protein kinase regulatory subunit, putative | 135 | 2e-006 |
| Q4RY53 Chromosome 3 SCAF14978, whole genome shotgun sequence. (Fragment) | 134 | 3e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G18540.1 cupin family protein | 122 | 4e-007 |
| AT1G53720.1 CYP59 (CYCLOPHILIN 59); RNA binding / nucleic acid binding / peptidyl-prolyl cis-trans isomerase | 111 | 8e-006 |
| AT2G33730.1 DEAD box RNA helicase, putative | 111 | 8e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
