Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN35322

FASTA Sequence
Unigene ID: UN35322Length: 701 SSR 
GACAGACTAAAAGTAAACAACACGAAATTATTTGGGGGAAACATAAATTGAGTTCAATAAGAAGAATACACAACAGGCCCAATCTA
TTGGGCCCAATAAAACTAGGGCCTAAAAGAGGAGCCACTGTGGCTTCTCTTACCACCCTCCTCTGGGAGGCCCTCCTGAGGACTGA
ACACTCAATCTGTCGAGGAGTGCGTTGAAGTCTATAGGCTGGCCACTCTCCTCCATCCTCTGAATCACGCTCATCACGTGTTCTCC
TCTGAAGCCCATGCTCACTAGCTTCTCTATCAGTTCACCGTATTTTGATCTTAAAACAGGCGGTGGTGGTGTCCCTGTGTTGCCAC
CACCTCCCTGATGCTGCTGAGGTGCGTACCCACCACCTTGTGGACCTTGCATGTAATGTCCTTGCTGCTGTTGCTGCGGAGGAGGC
TGAGTTGGTGGGTATTGCATCCGCCCACCTTCATACATGGCACTGGCATACCCGGGAGGAGGAGGAGGTCCTGAGGGTAGATACCC
ATCGCCTGTCTGTGGGCTATAGGACATCTTTGTCTGCTGAGGAGGAGCCTGTGGTGGTGGTGGTGCACCGTATCCGTAACCTTGCA
TCGATTGTTGAGGAGGTCCAGCGTATGGTGATTGCATCTGCATGCTGCTTGGCAACGGTTCTACTGGGGATTGGTTGCTTGGTGGT
GAAGGCGAGTATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869511 hypothetical protein ARALYDRAFT_491942 [Arabidopsis lyrata subsp. lyrata]8648e-091
NP_974630 uncharacterized protein [Arabidopsis thaliana]8621e-090
NP_194559 uncharacterized protein [Arabidopsis thaliana]8621e-090
CAB79632 predicted proline-rich protein [Arabidopsis thaliana]8621e-090
XP_002325597 predicted protein [Populus trichocarpa]3881e-035

Swiss-Prot top hits (Blast detail)Scoree value
P05142 Proline-rich protein HaeIII subfamily 11432e-008
Q9FLQ7 Formin-like protein 201404e-008
P05143 Proline-rich protein 21404e-008

TrEMBL top hits (Blast detail)Scoree value
Q3E6T9 Putative uncharacterized protein At4g28300.28621e-090
Q8VZR8 Putative proline-rich protein8621e-090
Q9M0H8 Predicted proline-rich protein8621e-090
B9IQU2 Predicted protein3889e-036
B9N5U7 Predicted protein (Fragment)3574e-032

Arabidopsis top hits (Blast detail)Scoree value
AT4G28300.1 hydroxyproline-rich glycoprotein family protein8626e-093
AT4G28300.2 hydroxyproline-rich glycoprotein family protein8626e-093
AT5G14540.1 proline-rich family protein1701e-012
AT1G61080.1 proline-rich family protein1422e-009
AT1G62440.1 LRX2 (LEUCINE-RICH REPEAT/EXTENSIN 2); protein binding / structural constituent of cell wall1153e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information