Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN35342

FASTA Sequence
Unigene ID: UN35342Length: 745 SSR 
AAGAATCAGAACAGATCAACCAAAACGCTACCCAATCCTTCAGATGATCAACGGAGAGACCCAAAGGCAAAATCAATGTCTCTGCA
GAAATTCAAGCTTCTCGCCACTCACTGCAGCACCGTCGCCGAGAGTCCAACGCGCAGCCCCGTCGTCCACCTCCGCCGCCGTAAAA
CGCTGCGTTTGCTACTCACGCGTTCATCAGATCGTTGGCGATCACCGGAGATCCAAAACAACGGCGAGGAACTGACGGGATCGGAT
GGTGCCAGGGGATTATCCGGGAAGAGAGATAAGATCCGATCTCGGCGGAAGCTGAGAGAGCTTTTCGTCTCTTCGCCTCCGGTGGA
GGAAGGCCAACGTCGTGGCGGCGGCGGCGGCGATGCGAGGAATGGAACGGAGAGGGCGTTAGTACCGGTTAACGGCGTTGATACTA
ACGGAGGTGTTGGAGAAGAGTCAACGGGTCGACGTATGGGCCTTAACGGCGCAACGAGGCCCATGTTATCTGGGACACTTCGATGT
AGGTTACTCCGAAGAGCTTGGCGTCCCGTTCTTGTAACTATTCCTGAACAATAAAGCAAATAAAAGATTTGACATTTTTTTTTTTG
ATTGATTAAAATTCCCTTTAATAAGTAACTTATGAATTTTAGTGAATCCATATGTCGTTTTTGGTTCTGGTTAGTTTTTAGGTGCT
TTTTTTTTGTGTGTGAAAAGTGTATTTCTTTGTTCTAGATATGTCTCGTTGCAAGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887085 hypothetical protein ARALYDRAFT_475783 [Arabidopsis lyrata subsp. lyrata]5692e-056
AAM66042 unknown [Arabidopsis thaliana]5592e-055
NP_564886 uncharacterized protein [Arabidopsis thaliana]5556e-055
XP_002516763 conserved hypothetical protein [Ricinus communis]2959e-025
XP_002873762 hypothetical protein ARALYDRAFT_909599 [Arabidopsis lyrata subsp. lyrata]2341e-017

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8L9C8 Putative uncharacterized protein5592e-055
Q9C618 At1g668905554e-055
B9RSP4 Putative uncharacterized protein2956e-025
Q9LF08 At5g162002042e-014
A5C0P2 Putative uncharacterized protein1325e-006

Arabidopsis top hits (Blast detail)Scoree value
AT1G66890.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 14 Blast hits to 14 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5562e-057
AT5G16200.1 50S ribosomal protein-related2613e-023
AT1G68430.1 unknown protein1314e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information