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Information for unigene UN35572

FASTA Sequence
Unigene ID: UN35572Length: 686 SSR 
CTATTATTCGACTATAATGCTTATCAACAACAAGCATATATATATATCACAAGGGAAATTATACCTCATGATGTGATTCCTACGGC
TACAAATGTAATCATCATTGTCTTTGTGAATTGTGATGCCATTTGGTTACGCTAAGGTTGCTCTTTTTCCCTTTGATTCTCTTGAC
GATTTTCTTGAATCCAGAAACTGACTATAGATGTCATAAAGCTTTTGCTTCTCGGTTTCAGAAACCGATGGTTTAGTTTTTGAAGC
GATAGACTTCAGAAGAGGATCAGTTATCATTGGAGTCGTTCCAGGCTCGGATTTATCTTCTTTGCTCAGAAACTCGTGAACAGCTG
CAAGTTGCGCATCTGAGAGAAGAGCTTGAAGATCAGCTCCACTAAAGCCTTCAGTCATCTGAGCTATAGGATCTAGGTCAACATCA
TCAGCCATCGGAAGCTTTCTAGAGAGAACTGTAAGAATCTCTAATCGCTCTGGTGGGGATGGGAAGTCGCACATAAGAAGGCGATC
AAGCCGGCCAGGCCTCAGTAGCGCAGGATCAAGCAGATCTGGCCTTGTTGCGGCAAATATAAAGACCCCCGTCAGAACTTCAACTC
CATCCAGTTCTGTCAAGAATTGATTAACAACTCGATCAGTAACTCCAGTGTTGTCATGTCCTCTCTTGGGAGCAATTGAATCGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871340 hypothetical protein ARALYDRAFT_908820 [Arabidopsis lyrata subsp. lyrata]8593e-090
XP_002871329 peroxisome biogenesis protein PEX1 [Arabidopsis lyrata subsp. lyrata]8531e-089
NP_196464 peroxisome 1 [Arabidopsis thaliana]8461e-088
AAG44817 peroxisome biogenesis protein PEX1 [Arabidopsis thaliana]8461e-088
BAB09996 unnamed protein product [Arabidopsis thaliana]7931e-082

Swiss-Prot top hits (Blast detail)Scoree value
O43933 Peroxisome biogenesis factor 14002e-038
Q5BL07 Peroxisome biogenesis factor 13913e-037
Q54GX5 Peroxisome biogenesis factor 13761e-035
P46463 Peroxisome biosynthesis protein PAS13618e-034
O74941 Peroxisomal ATPase pex13464e-032

TrEMBL top hits (Blast detail)Scoree value
Q9FQ60 Peroxisome biogenesis protein PEX1 (Fragment)8467e-089
Q9FNP1 Similarity to ATPase7939e-083
B9RV01 Peroxisome biogenesis factor, putative7257e-075
C5YNA6 Putative uncharacterized protein Sb07g0244705071e-049
B9GKY7 Predicted protein (Fragment)4901e-047

Arabidopsis top hits (Blast detail)Scoree value
AT5G08470.1 PEX1 (peroxisome 1); ATP binding / ATPase/ binding / nucleoside-triphosphatase/ nucleotide binding / protein binding8537e-092
AT3G01610.1 CDC48C; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding2694e-024
AT3G09840.1 CDC48 (CELL DIVISION CYCLE 48); ATPase/ identical protein binding2632e-023
AT1G50250.1 FTSH1 (FtsH protease 1); ATP-dependent peptidase/ ATPase/ metallopeptidase2587e-023
AT3G53230.1 cell division cycle protein 48, putative / CDC48, putative2587e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information