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Information for unigene UN35580

FASTA Sequence
Unigene ID: UN35580Length: 1261 SSR 
TCATATTACTGTATAAAAAAGTATTGCAAAGTGTCTCTTTTGTACCCTCAAGAACCATTATCTACTACTACTAACTACAACTACTA
CATTTTCACAGACAAAAAAAACATAAGATAAGAGTTCAAAGATCATATAAACACCAAGAACTCATCATCTTTTTGAGACAACCACT
AATATCAACATCGACATTGACACAACGATCTTGAACCCTGAAGTATCCCAAAAGTTCTGTTTCTCTCCAGACACAGATTCATTCAG
CTGTTTCCCAGTAGCCTGATCTCTTAGCTCCTTGATCGCCTTGTCTCTCTTCTCCCCCATCCTCTGCAGCTTTCTTGTCTGGCTAC
GAGCTTCTTGCAGACAAAACTCCATCTTCAGCACCTTCTTCCTCAACTCTTTATCTGTTCTTCTTTGCTTCTCCAACTGAGATTCA
AGCTCCTTGGCCTCGAGTTTCCAGTGACCTGTCATTAACCTTATCTCATCTTTGAGTTTTGCAATCTCTTCGTCTTTTGCACCCAA
CAGCATGTTCACTCTATCCAAGTTCTTTGGAGAAACCTCTTCCACAAGTCTCGTTAGCTCACATTCCGTGTCTTTCCCTGACTTTG
CAATCTCACGCTCGATTCTCGTGACCTCGTCCCTCAGCTGCTTCTGAGAACACTCTCTCGTTTTTAGATCTCGCTGAAGATTATCA
AGCTGGTGGCCTAGCTGAGTCACACGGTCTTCGTGCTCGCTTAGCAAACGTGTTTTATCGTCGAGTTGTTCTGCGAGCATTGTGCA
TTGGAGCTGTGCGGATTGAGCAGAAGCAGCGCTTGTTTCTGCCAGTTCCTTTGTTAAAGCTAGCTGCGATCTCAGGTCGTCTACTT
CTTCCAGAAACTTTGTAGCAGCAGATGTTGAAGCTTCAAGCTGACAATTCCTATCTTCCAATGTCTTCTGCAATTTACAGATCTCC
CTTTCCATGTTCTTAGCTTTTGTCTCTGCTTCTTTTCTAGAAAGGCTTTCTTTAGCAAAGAATTGTTCTTGAGAAATCAAACGGCC
TTTCACTTGCTTAAGCTCAGCCGCCATAGACACCACGTTGCGCCGGAAACTCTCTTTCTTCCCATCTAAATCTCTCAGAAGCGGAT
CCACCGCCGTTTTCACGGGATCAGGCATCAGGGTTTTGTCGGATCTCTCATAAAAATCGGTGAATGAGTTCTTGTGGAAAACTAAA
GAAGATGGAGAGAGAGAGAGAGAGTTCAGCAGGAGAGCTTTGTTTCGAAATCGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568487 uncharacterized protein [Arabidopsis thaliana]14029e-153
XP_002874325 hypothetical protein ARALYDRAFT_326902 [Arabidopsis lyrata subsp. lyrata]13401e-145
AAD09217 plant IF-like protein [Arabidopsis thaliana]11188e-120
NP_566262 uncharacterized protein [Arabidopsis thaliana]11188e-120
XP_002276639 PREDICTED: hypothetical protein [Vitis vinifera]10972e-117

Swiss-Prot top hits (Blast detail)Scoree value
Q03410 Synaptonemal complex protein 11471e-008
Q62209 Synaptonemal complex protein 11443e-008
Q60563 Synaptonemal complex protein 1 (Fragment)1425e-008
P02565 Myosin-31372e-007
Q9Y623 Myosin-41353e-007

TrEMBL top hits (Blast detail)Scoree value
Q9M9L3 F10A16.12 protein11185e-120
Q9ZRC5 Plant IF-like protein11185e-120
B9N420 Predicted protein10702e-114
Q5PP55 At5g2677010576e-113
B9RFQ5 Putative uncharacterized protein10495e-112

Arabidopsis top hits (Blast detail)Scoree value
AT5G26770.2 unknown protein14033e-155
AT5G26770.1 unknown protein14033e-155
AT3G05830.1 Encodes alpha-helical IF (intermediate filament)-like protein.11192e-122
AT5G26770.3 unknown protein10574e-115
AT1G09470.1 unknown protein8702e-093

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information