 |
Information for unigene UN35634
| FASTA Sequence |
| Unigene ID: UN35634 | Length: 1312 |
SSR | | TTATTATATAGCAAATTAATAATTTCATATATACAATAATTATTTTTGTTTATTTACAACCACAAACTATCCAACCAAATCTCCAT
AATCTATTTACATTCAAGAATTTGCGTGAATCTATACAAAAGACATTGTTATACTTCGAAATAGATAAAAGCAAGTTCAGTCTTCA
AAAAACGATGAAGTTGTCGATGACCGAGTAGTTTCACTCCCCATCTTCTGAAAGAGATCACCAAGCGCACGGTAGAGTGGAGCAGC
AGCCGGCGGTTTAGGCAAAGAGCCAAGGAGGATGTCAGACGCAGCTAGGGACTGGCTCCCGTAGAACCTTGAGTTCTCACTTGTAC
GTGTTGTGAATATGCTTCCTTCAAGCGAGCATCCAACAAATGCACCTTTGCTGCAGCTGTAGGTATAGCAAGCGGCATAACCACCA
CTACCTGCTCGGATATCTGCTTCAACAGCTCGTCCAGTCACACCAACCGCAGCGCTTAAACCAGCTCCAACAACAAAATGGGTGTT
ACTCCCAAACGTCCGGATGGCCTCTCGAGTTCTTAAGACAATGATAAAGTCTATGAACTCTCCCCCTGCCTGAGCACCCCATTCCA
AACCAAACGAAGAGATAGCTGAAGGTGGAGACCAGGAGCCATCATCTCTACGAGCAACCACAAGTCCAGTCCCGATTCTATACGTA
ACCATTACTCCAACTCTGGCAACAGTGATTACTGCAAGACCTTTTGCTTGTCTTAGAATGGCATCTGGGATGGACCTCTCAGTCCT
CGAAGAACCAACCTTGGATATATAACCCCGAATAGTGTTTGTCGCTTTATAAATCTCATACTCCATTGACTGTCCCCATGGAAAGT
TCACCCTAGACCTCAACGTACTGAGATCCGTCAAGTCATGAGTTGGCAACTGAGCAGCAGGACTCACTTGGTCCATCAGGTAAGGC
TGCACGGTCTCCAACCTCACACAACACGCATCACAGACCCTCTGAGGATCCGAAACGCGGAACTTCACCGGAAGCAAGCTTCTCCC
TTTAGAACAGTCTCCACAGAACAACCCTCCGCAGTATCGACAGTGATGACGCGAACACATGATCTGGTCCAAGTCTTTTGCTATCG
CTTTCACGAAAAGTAGAATCTTCTTCTTCTTCTTTAGTCTCTCTGATGCTTTGACTTACGACATTATTAGTATCAGAATGCCCATA
AGAATCACGAGCGGTACCATCCATCTTTTTTAGATTTGATCCTTCTCTTTCGCCTTGGATTCTTCTTACGATTTTCAGTTCCTTTC
GTTTGGGGGAGAAACTCAGAAA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_174273 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] | 1489 | 8e-163 |
| XP_002890832 zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] | 1477 | 2e-161 |
| NP_001031110 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] | 1456 | 5e-159 |
| XP_002305051 predicted protein [Populus trichocarpa] | 1270 | 2e-137 |
| XP_002522272 zinc ion binding protein, putative [Ricinus communis] | 1267 | 4e-137 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P32793 Protein YSC84 | 385 | 4e-036 |
| A7A261 LAS seventeen-binding protein 3 | 383 | 6e-036 |
| P43603 LAS seventeen-binding protein 3 | 383 | 6e-036 |
| Q9URW6 SH3 domain-containing protein PJ696.02 | 383 | 6e-036 |
| Q96HL8 SH3 domain-containing YSC84-like protein 1 | 360 | 3e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84WW7 Putative uncharacterized protein At1g29800 | 1489 | 6e-163 |
| Q2V4K1 Putative uncharacterized protein At1g29800.2 | 1456 | 4e-159 |
| B9H2D6 Predicted protein | 1270 | 1e-137 |
| B9S8F3 Zinc ion binding protein, putative | 1267 | 3e-137 |
| B9I1G6 Predicted protein | 1248 | 5e-135 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G29800.1 phosphoinositide binding / zinc ion binding | 1490 | 2e-165 |
| AT1G29800.2 phosphoinositide binding / zinc ion binding | 1456 | 2e-161 |
| AT3G43230.1 zinc finger (FYVE type) family protein | 862 | 2e-092 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
