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Information for unigene UN35680

FASTA Sequence
Unigene ID: UN35680Length: 1094 SSR 
GGCGAAAGACTAGTGACACTATGAACTTGAGAATTGTTCCTAGACATCAAAAGAAAAAAGAAAGATTCATCTACAATTCTACAAGA
ATCCTCCCAAATCAGCAAACAACATCACTGAACGAGAGAGGAGCTCTTGCGGCCAACGCCTCAGCCTTTTCCATCTGCAACTGAGT
CTCAAGATCCAAGAACATTAGCTTCAGTTTCTGCAACTGTTCCTCCATTGATAGCAGCCGTGCCCCAATACTCTGTTCTTTCTTCT
TCTTTTCAGAAACCTCATTCAACTTTGTCTTCAGCCAATCCAGTTTAAAGCCGATATCAATCAGATCAGCCAGCGTGTCATCAGCA
TTACTCAGATCATCCTCTGAGAGCTTTTCTGGTGACTGGCACAGAAGCTGGATGAGGCTAAGGAGTTCATTCATGTACGCTCTTTT
GATCTGTCTGTTCTTAGGACGGAAGCCTAATGCTATGTCCGGGTGTCTTCTGAATATATGTCTCACTGATTCTACCTGAGAGAAAA
AAACGTCAAACCCATTGACATCCATTGTTTCCTTAGCAGCCTCAGTAACCGATGTATCAGTGATAACACCATTTTCCACTGTCTGA
GAGGCATCCCCCAAGGGCTTCACTTGGTCTAGAGAGGTTCTGTTTATAACACCACTGTCATTGAAAACAAAAGATGAAAAAGCCTC
ATCACCGACATCTTCTTTAGGTGCATCATCATTGGAAACTTCAGTCTCTACTGCCACACTGTTACTCTTTAAACCATGATTTCCTA
CTGTGTGAGAAGCCTCTTCCAAAGCACTGGATTGGTTCGAAAGACTTATGTCCACACCTCCATCATCTGACAAAGGAGATGAAGCA
TCATCACCATAGACATCCTTTTTAGACGAAACACTACCCTCACCTGTAACCTCGTCAAAAAGACCATCATCATCATCATCATTATC
AGAACCCTCTTCAGATGAGCCATCATCATCTAAATTCGTAACCTCAGTTTCTTCACAAGAAGCACCCCTCTGAGATTTTCCGACAG
ATTCATCATCCGCTTGGCAGCTAAGAGGTTCAGTAATCTTCTTGACAGTTTCCTCTGGTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878217 hypothetical protein ARALYDRAFT_907320 [Arabidopsis lyrata subsp. lyrata]6241e-062
XP_002878211 predicted protein [Arabidopsis lyrata subsp. lyrata]6195e-062
NP_191391 Ubiquitin-specific protease family C19-related protein [Arabidopsis thaliana]5721e-056
NP_191386 phospholipase-like protein (PEARLI 4) with TRAF-like domain [Arabidopsis thaliana]4251e-039
XP_002878206 hypothetical protein ARALYDRAFT_486280 [Arabidopsis lyrata subsp. lyrata]4233e-039

Swiss-Prot top hits (Blast detail)Scoree value
P04929 Histidine-rich glycoprotein1551e-009
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745571461e-008

TrEMBL top hits (Blast detail)Scoree value
Q9M2I4 Putative uncharacterized protein F9D24.2305729e-057
Q9M2I9 At3g582704251e-039
Q8L7J1 Putative uncharacterized protein4204e-039
Q9SHT4 Putative uncharacterized protein At2g054004204e-039
Q9M2J4 Putative uncharacterized protein F9D24.1303953e-036

Arabidopsis top hits (Blast detail)Scoree value
AT3G58320.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT3G58270.2); Has 134 Blast hits to 120 proteins in 3 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5725e-059
AT3G58440.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein4865e-049
AT3G58270.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein4256e-042
AT3G58270.2 meprin and TRAF homology domain-containing protein / MATH domain-containing protein4256e-042
AT2G05400.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein4202e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

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