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Information for unigene UN35751

FASTA Sequence
Unigene ID: UN35751Length: 1073 SSR 
CTCACTGACTCTTCTCTGCAAATTTATAACTAAAAACTGAGGAGAAACAAATCTTCTTTTGGATATTTCCAAAAGTAATACAAATC
CAGAAAAAACCAAAGAAGGAAAAAAAATTCCAATAGTGAAATTTTAAAAACTCCATTTCCAGACCTTGACGCTAAGATCAGACTTA
CACTTAGTTCTCTTCGACGTTGCTACGGTCGGAGTTTTACCTTTGGGCACTGTCCCTTCGAATCCTTGACACGTCACTTTGATCTC
AACTCCTTCGCTCTTCACCTTCCCCATTTGCATCTTCACCTTCGTCCTCATCTCTATCTCCAACCCCACGCGCGCCCGCGCCAGAT
CCGACTTCAGACGCCGAGCTTCCTCCGGATCCAGCTCACGCGCCGACGTAGACGTCGCGATAACCCCCCGAAACGTCGTCTTGTTC
TTGTTATCGCTGAAGAAAGCCGGAACCGTCCCGTTCGCCACCGTCTCGCCGGACTTGGCCGACTTGACGGCGACGGTGAAGGGAGC
GTAGGAGAAGGTGAGGTGGCCGTTGGGATTCTCCGAGAGCAGAGTGAAGTTGAAGAAGGAGGAGAGGTGGGAGACGGAGGTGTCCG
AGGAGGTGGTGAGGTTAACGCGGCTGATCCGAAGCGACGGGACGGAGAACGACGGAGGACGAGGGCGGTAGATCACGTAGACGGCG
GTGGCGGCGATCGCCGCCATGAGAGCGAGGAGGAGGAAGATGAGTATCGACCAGAAGCAGCAGCAGCAGCGGACTCGTCGGCAGCT
TGGCCGAGATTGGTGGTGGTGGCGGCGGCTGTAAGGCTGCGGACGGTAAACCGGCCGGTTTGCCGGAATGTAGACTTGAGGTTTCT
GGTTAGCTGTACCGTTTGCTGTTCCGTTACCGTTAACTGCAGAGGGAGCCGGAGGAGGTGCTGATGGGACTCCGTTAGTGGCGGTT
GCTGGCTTGGAAGCTGGGAAGACTCGGTCAGTCATCTTCTATTTCTCAGATTCTTTCTCCTCTAGACAGATCTGAGCAGCAGACAA
GATAGAGAGAGAGAGACGACACAGTGTTTTTTATGGAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871503 hypothetical protein ARALYDRAFT_488029 [Arabidopsis lyrata subsp. lyrata]12656e-137
NP_196750 uncharacterized protein [Arabidopsis thaliana]12647e-137
AAM61128 unknown [Arabidopsis thaliana]12584e-136
XP_002324769 predicted protein [Populus trichocarpa]6841e-069
ABK93997 unknown [Populus trichocarpa]6616e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q9FPQ6 Vegetative cell wall protein gp11263e-006
P32323 A-agglutinin anchorage subunit1245e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LYI4 Putative uncharacterized protein F14F18_6012645e-137
Q8LFZ0 Putative uncharacterized protein12583e-136
A9PAD0 Predicted protein6849e-070
A9PC94 Putative uncharacterized protein6614e-067
B9HDM5 Predicted protein6614e-067

Arabidopsis top hits (Blast detail)Scoree value
AT5G11890.1 FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17620.1); Has 455 Blast hits to 454 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 453; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).12652e-139
AT1G17620.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11890.1); Has 539 Blast hits to 538 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4112e-040
AT2G27080.1 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related1854e-014
AT2G27080.2 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related1854e-014
AT5G21130.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: harpin-induced protein-related / HIN1-related / harpin-responsive protein-related (TAIR:AT2G27080.2); Has 592 Blast hits to 591 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1712e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information