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Information for unigene UN35753
| FASTA Sequence |
| Unigene ID: UN35753 | Length: 740 |
SSR | | GGAACTTTAGCAATACGAGCATTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCGTCCTGATTTGTATAAACCCTAACGACTACTAGA
TTTCCGGCTCCTTTAATCGGAGAAATTGGATCATGAGTCGTTACGATAGCCGGACCGGTGACTCCACCTCCTACCGTGACCGTCGA
AGTGACTCGGGGTTTGGTGGAGCTTCAGCGTACGGAAGCTCAGCTAGTAGTAAAAGGGAGACTAGTGTTGAGTCTCCAAAGAAGCA
GCCAGATTTGGATGGTTTGACTCCTTTCGAGAAGAACTTCTATGTCGAGTCACCCTCTGTTGCAGCTATGACTGAGGCTCAAGTGG
AGGAGTATCGACGGATGAGGGAGATCACTGTTGAAGGTCGTGATATTCCTAAACCTGTCAAAAGCTTTCGTGATGTTGGCTTTCCT
GATTATGTTTTGGAAGAGGTTAAGAAGGCTGGTTTTACTGAGCCTACCCCCATACAATCTCAGGGGTTGCCAATGGCGTTGAAGGG
ACGTGATCTCATTGGCATTGCTGAAACTGGCTCTGGGAAGACTCTTTCTTACTTGCTACCTGCCATAGTCCATGTGAATGCTCAAC
CAATTTTAGCTCCTGGGGATGGTCCAATCGTCTTGGTTCTTGCTCCGACACGTGAACTGGCTGTGCAGATACAGCAAGAAGCGTCT
AAGTTCGGTTCATCGTCAAAATCAAGAGCACTTGCATTTACGGTGGTGTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002891814 hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp. lyrata] | 876 | 4e-092 |
| NP_175911 DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana] | 866 | 5e-091 |
| XP_002527412 dead box ATP-dependent RNA helicase, putative [Ricinus communis] | 835 | 2e-087 |
| XP_002279117 PREDICTED: hypothetical protein [Vitis vinifera] | 813 | 8e-085 |
| AAD46404 ethylene-responsive RNA helicase [Solanum lycopersicum] | 805 | 6e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C718 DEAD-box ATP-dependent RNA helicase 20 | 866 | 3e-092 |
| Q5QMN3 DEAD-box ATP-dependent RNA helicase 20 | 717 | 5e-075 |
| Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 | 589 | 3e-060 |
| Q8W4R3 DEAD-box ATP-dependent RNA helicase 30 | 580 | 4e-059 |
| Q6CIV2 ATP-dependent RNA helicase DBP2 | 579 | 5e-059 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SN43 Dead box ATP-dependent RNA helicase, putative | 835 | 1e-087 |
| Q9SWV9 Ethylene-responsive RNA helicase | 805 | 4e-084 |
| A2Q465 Helicase, C-terminal | 755 | 3e-078 |
| B9MWR8 Predicted protein | 739 | 2e-076 |
| B8LKZ7 Putative uncharacterized protein | 738 | 3e-076 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G55150.1 DEAD box RNA helicase, putative (RH20) | 866 | 2e-093 |
| AT5G63120.2 ethylene-responsive DEAD box RNA helicase, putative (RH30) | 580 | 3e-060 |
| AT5G63120.1 ethylene-responsive DEAD box RNA helicase, putative (RH30) | 580 | 3e-060 |
| AT1G20920.1 DEAD box RNA helicase, putative | 369 | 1e-035 |
| AT1G20920.2 DEAD box RNA helicase, putative | 369 | 1e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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