Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN35842

FASTA Sequence
Unigene ID: UN35842Length: 1191 SSR 
GGCAGATATGATTATAGATTCAGAAACAAGAAGTAGCTAAACAACACACACCACAACATAAACGAACCCAACACAAACAACAGTCT
TGAATTAATAAGATAGATACCACTAAAAGTAGCTAAACAAGACACAACACAAACATAGTTTTGATTTAAACCTTGGCATCTTAACA
AGATAAGCCATAAACATTCAACTACTAGGCACAAGACTCATATAAGACGAGCAGACTAGACTACTTGATGATGTGAAACTTGATGG
TGTGAACCATGTTGTTACTACCGGCCTTCTTTAACTCGCATATCATTTTGTCCGCCGACGTCAGGCCGTTCCTTCTTATCACAGCT
CCATACCCTTTGATAAACACACTGTTATTCGTCTGAATCTTGATCTTCGTCGGCAGCTTCCCGAACTTCTTCACGAGTGGATCGAT
GAGAGTTATACTCTCAGAGAAGTTTAAGCCGAAGTCTTTGATAACCTTAGTCGGTATGCGCAGTTGGCTTATCTTCTTCGGGTTTA
TTGTAACTGGAAAGAAGGCGTTGCTGCGATCATCCAGATATCGCCTTTCATCATCATGGTTTGCCTCAGTATCATCATCATCAGAA
CCATCAAGCGCTACAGCATCTTCATCATCATCGAGAATAACATCATCATTATCATCATCAGCACAATTGTAATCAGCATCTTGAGA
ATCATCATCATCATCATCATCATCACTGAGAACTAACACATCATCAGCCTCTTCTGTTTCTTCTTCGCTTTGCACTGAAGTTCTTG
CGAGTCTTTTACACATGGTGGGAGACTCGTAGATACAGAACTTGAAACACTGCGAGCCATCGAATTCAAACTCCAGCACGTTTCCA
CTGGTCAGAGACTCGTCCTTTGCTATCCTCTTCCACCCGTTAAGCAGAACGTATCCTCTCTCAACTTCACCGACACATCTCCTCAA
GGCCATCTTCCAAATCTTTCCGTAAATACTTTTAAGGGTTACGTATTTAGGCAGAGGAGTTGGTAAGAAGCTGTTGAAAGAAACAG
GTAACTCCATATCATCTCCAGATATACCAGGCATGTACACTCTGAAGAACTTTGGCAGAGAATCTTCCGAAGGAGTAACTGGCTTC
ATTGTTTCGTCACCCCGTCTTTTTTTTTTTTGCTTGTAGCCGCAACCTGAAAACCCTAGTTCTGAAAGATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001190577 AP2/B3 domain-containing protein [Arabidopsis thaliana]8364e-087
XP_002866372 hypothetical protein ARALYDRAFT_496153 [Arabidopsis lyrata subsp. lyrata]7559e-078
Q9LVG1 RecName: Full=B3 domain-containing protein At5g601304672e-044
NP_200821 AP2/B3 domain-containing protein [Arabidopsis thaliana]4502e-042
Q9LST3 RecName: Full=B3 domain-containing protein At5g601424109e-038

Swiss-Prot top hits (Blast detail)Scoree value
Q9LVG1 B3 domain-containing protein At5g601304671e-045
Q9FHB0 B3 domain-containing protein At5g601404436e-043
Q9LST3 B3 domain-containing protein At5g601424104e-039
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745572133e-016
P04929 Histidine-rich glycoprotein2017e-015

TrEMBL top hits (Blast detail)Scoree value
Q4TES1 Chromosome undetermined SCAF5157, whole genome shotgun sequence. (Fragment)2118e-015
A4HXX6 Hypothetical repeat protein1883e-012

Arabidopsis top hits (Blast detail)Scoree value
AT5G60130.1 transcriptional factor B3 family protein4508e-045
AT5G60140.1 transcriptional factor B3 family protein4435e-044
AT5G60142.1 DNA binding4103e-040
AT3G53310.1 transcriptional factor B3 family protein2634e-023
AT3G46770.1 transcriptional factor B3 family protein2563e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information