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Information for unigene UN35939
| FASTA Sequence |
| Unigene ID: UN35939 | Length: 1180 |
SSR | | GGGAGAGAGAGAGAGAGAGAGTTGGACTTTCAGCGGAGGATCCTCTCAGAGACGACAATGGCGGAGGTACAGTGGCTATTGGTAGT
TCACGGAGTGATGACGTTAACGGTGATCAAAGGCACACCTTTCCAATGGATTCACTACTTCATTACTCGCGGAGCCTACGCTTACT
TGCTGAGGTTTGTGGGAATGGTGTTTGGTTCCAAGGGTACGGACATTGTCTTAACGGTTGAGCAGTTCTGTTGCCACCGTCCTAAT
CCCACATTGCAAATCATATACATAGCTATTATTGGATCAGTATACTTTGTGATTGCAAAGTCTTCCTTCATCTATATACCTGGATA
CTATATTGGCCATGTTCACAAGTACACGAGCTTTGTGGCTGTTGTTATGGGTGTCATACTTTTCTTATTAACGAGCTTTTCTGATC
CAGGTACCGTGAACGCTTCCAATGTTTCACACTACATTTCTGCTTACCCTTATGATGATATCATTTACTCTGAGAACGAATGTTCG
ACGTGTAGAATCCCAAAGCCTGCTAGATCCAAGCATTGCAGCATATGCAACCGCTGTGTAGCTCGGTTTGACCATCACTGTGGCTG
GATGAATAACTGCATTGGAGAAAGGAATACTAGATATTTCATAGCTTTTCTCTTTTGTGATTTTTTGTAGGCATTTCCTTCTTTGC
TTGTACGGAGCAATAACCATTGGGTTTATTCTTGCTGGGCGAGTTAAAGAACTCCGTGTTGTACATATCTTAACAGTCTATTATGG
TGTAGAGAATTCTTTCCGCAACTTAGCTCCTCGAGTTTTACAGTGGCTGGTTGGTACATACAACACCCAAATACTTGTGATGGTGT
TTCTCGCCGTTGTTTCTCTCCTCCTCGCTGGCTTCTTTGCTTACCACTTAAACCTCTGCTTAACCAACACAACAACTAATGAGACA
TTTAAATGGAGAGAATACATAAGGTGGAGGAAGAAACTCAGTGAATCAAAGGCAAGAACATCCTCTGCCCATGACCATGATGATGA
AGCAGAGGAAGCTATAGTGAAACGGAATGTGTATGATAGAGGAGGTTTCCAGAACGTTTCTGAGATTGTTTTTCCTTTATCGTCAA
GACCACTTACTTCTTGCATACCAAAACCCAAGTCGGAATAGTTAAAAGTTACGTTTAGTCAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882388 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 878 | 5e-092 |
| NP_187148 DHHC-type zinc finger-containing protein [Arabidopsis thaliana] | 875 | 1e-091 |
| NP_974224 DHHC-type zinc finger-containing protein [Arabidopsis thaliana] | 875 | 1e-091 |
| AAG51421 unknown protein, contains TNFR/NGFR cysteine-rich region; 28705-27186 [Arabidopsis thaliana] | 875 | 1e-091 |
| BAF00409 hypothetical protein [Arabidopsis thaliana] | 867 | 9e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q3EBC2 Probable S-acyltransferase At3g04970 | 875 | 5e-093 |
| Q9D6H5 Probable palmitoyltransferase ZDHHC4 | 303 | 1e-026 |
| O60069 Palmitoyltransferase swf1 | 293 | 1e-025 |
| Q58DT3 Probable palmitoyltransferase ZDHHC4 | 290 | 3e-025 |
| Q5FVR1 Probable palmitoyltransferase ZDHHC4 | 276 | 1e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6TLV1 Putative uncharacterized protein | 779 | 1e-080 |
| B9MZN8 Predicted protein | 750 | 2e-077 |
| B9REY7 Zinc finger protein, putative | 748 | 4e-077 |
| A2Q3H2 Zinc finger, DHHC-type | 742 | 2e-076 |
| C5WYS1 Putative uncharacterized protein Sb01g034580 | 693 | 9e-071 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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