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Information for unigene UN35978
| FASTA Sequence |
| Unigene ID: UN35978 | Length: 853 |
SSR | | GGAAAAGCCAGAGTTTCGAGATTCATTGACCCAATCTAACTGAGAAAAAGAAGCCATGTCAGGGACCGAAGCAACCGATGACTCAG
AAGAAGAAGAAGAAGAAGAAGAGTATACCTCGCCGTCGCAACCACCCTCTTCGGCGAATTTCGATAAAGATCGACACTTGGTGTAT
TTGCAGATGATGTACGAGTTGCTTCCGTACCATTACCAATCGCAGGAGATCAATCGACTCACCCTCGCTCACTTCATAATCTCTGG
ACTTCACTTTCTCGGCGCAACAGACCGTCTAGTGTACTTTCAACCCCCTGCTAAAATGGAGTCCACACCAGTCATTGTTGCTTCAA
CTCCTGCTCTGCTCTTCACTGCAGCTCCCCTGCAGAAAAGAAGTGGCGGGCGATACAAGTCCAGATGATGTTTCTAAGAGCTTGTA
CCGGAATGGGTATTTGAGAGAAAGATCATCAAGTGGAGATTTTTTACTACATAAACAAATTGGCATCTCCACGAACGGTCCGATCG
CAACTAGAAGAAGAGAACAAGAAAGCTGTGGCTACATGATGTAGCCTACATCGTGCCCTTGAGATTATTTTCAGGACAACTTACAT
TATGAAGTTCAAGTGTAGTTTAAGAGCTCTAGTGGATGTGTAGTAAATAGAATGATAGTAAAGTAACCTATTTAACAAATCTCACA
TTTTAGATAAATCGTTTTCTTGACATTGCCCTTTTTCTTCAAAGTTTAAAACTCAAAACTTTACTGCATGTGTTTCCTTGGATTCA
CTAATCTTTTTTCCTGTAGATTTGGTATGTATGTAACGGAGTTGTACCGTAATTAATTATATCAAATCTTTTAAAGCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181487 geranylgeranyl transferase type-1 subunit beta [Arabidopsis thaliana] | 301 | 2e-025 |
| AAG40865 geranylgeranyltransferase beta subunit [Arabidopsis thaliana] | 301 | 2e-025 |
| XP_002312088 predicted protein [Populus trichocarpa] | 198 | 2e-013 |
| XP_002532295 geranylgeranyl transferase type I beta subunit, putative [Ricinus communis] | 196 | 3e-013 |
| XP_002879805 geranylgeranyltransferase-I beta subunit [Arabidopsis lyrata subsp. lyrata] | 180 | 3e-011 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80642 At2g39550 | 301 | 2e-025 |
| Q9FPP6 Geranylgeranyltransferase beta subunit | 301 | 2e-025 |
| B9HMG6 Predicted protein | 198 | 1e-013 |
| B9T226 Geranylgeranyl transferase type I beta subunit, putative | 196 | 2e-013 |
| Q6EMC1 Geranylgeranyltransferase type I beta subunit | 174 | 9e-011 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39550.1 PGGT-I; CAAX-protein geranylgeranyltransferase/ protein heterodimerization | 301 | 1e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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