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Information for unigene UN36075
| FASTA Sequence |
| Unigene ID: UN36075 | Length: 1342 |
SSR | | AGCAACAAAAAAAATGATCTTTGACATTATATGCAGACATGCAGCATTTCTTGATACACAAGCAACCCTCCCACAAAACCAAAATC
AAGAAAATCCCAAAGTTGGATCAAAAACATGAATGAATGCAATCTTTTCTTTTTCACCGCCAAGCTTCAAACAGCTCAACTCTGTA
GTTCACACGTCCAACAATACTACTAGCATTCTTCATCTTCCTTGTCTTTCATTTCAACCTCAACGGTATCTACAGCTTCCTCCTTG
TTAGCTTCCATGAAATGCAACAACTGGCTGCTACTCTGATCACCATTCTCGTCACTAGGACCCGGGTTCGAGGCTTGAACCAACCT
ATCTCGAGACTCTTTCCGTTCTTTAAGCGTCTTTACAATAAGGGTCTTGAGAAAGTGCATGACTTGCACAGCATACATCAAAGCAG
TCAGTGGATCCAACATCTGAGTCATGTTAGGTACGAAAACCATAGCTATGTTCCGAGCATTCATCTTGTTAAGACATTCCATCTCC
ACAACATCAGCCATCAGATTGATTGACCAATCTAACAAAGACGCTTCCGTTGAAGGAAGCATCCTCACAAGCTCCACACACTCATC
TTCGCTTTCAGACTCCATCACTTTCTCTGGTGAGAGTGTATCCAACACACCACTTGGAAGCTCCCTAAACCAAGCTTAATGAGACT
TGCCAAACAATGTACATCAATGTTATCAGGTATAACACCTCTGTTCAACTCTTCTCTTACGTACTCCTCTTGAGCATTCTCACCAT
TAATCCTGAAGATTCCTTCTACCCTTAACCCGCCTCTACTGTACAAGTGACTCTGCATCATCAAGAGTATGGTAGGCACAACGTTC
CCTCTAGTATCGTAAGACAGCTGCATTGACTCTGTCGACACACCAAACACCGTTGCACTTGCACTAGGAGCACGTCTAGGGACTTC
AGGTTCGAACTCAACAGGCAAGCCGAGGAAGCCGTGGAAACGATCAAAGGTGACATGAGCCACGTGTCTAACGTCGGTAGGGACAC
CAATCTCCATGGAAGAAAGAAGACTCTCTTCTTCTTCTTCTTCTTCGCCAACGCAGCCACCAATCACAGATCTTCTGAAAGCAGAG
ACGAGAATCTCCAAAGAAGAGGAAAGCTCGGATCTTTCTCTCTCGTCTTCCTCGAGGGTAATGTTAAAAAGAGAATGTGGGTCTCT
GTTACTACTACTACCATCATTGCCTAGGGAGGAGCTTGGAGGTGAAGGGAAGTGGCATGATTTTAGTACTCTAGCCATTCTTGTCC
TTATTATAAAAATCAAGACTTGGAGTGATGGGTACTCTTGAAAGAACAGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187756 rac GTPase activating protein [Arabidopsis thaliana] | 837 | 3e-087 |
| XP_002884847 hypothetical protein ARALYDRAFT_317933 [Arabidopsis lyrata subsp. lyrata] | 837 | 3e-087 |
| CAN67621 hypothetical protein VITISV_014711 [Vitis vinifera] | 604 | 3e-060 |
| XP_002282200 PREDICTED: hypothetical protein [Vitis vinifera] | 604 | 3e-060 |
| XP_002523821 gtpase activating protein, putative [Ricinus communis] | 592 | 9e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54Y72 Rho GTPase-activating protein gacA | 182 | 1e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9CAX8 Putative rac GTPase activating protein; 62102-60058 | 837 | 2e-087 |
| A5B7U5 Putative uncharacterized protein | 604 | 2e-060 |
| B9SCV2 Gtpase activating protein, putative | 592 | 6e-059 |
| B9HBY8 Predicted protein | 590 | 1e-058 |
| O82458 Rac GTPase activating protein 1 | 585 | 4e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G11490.1 rac GTPase activating protein, putative | 837 | 1e-089 |
| AT5G22400.1 rac GTPase activating protein, putative | 559 | 2e-057 |
| AT1G08340.1 rac GTPase activating protein, putative | 515 | 3e-052 |
| AT4G03100.1 rac GTPase activating protein, putative | 515 | 3e-052 |
| AT2G46710.1 rac GTPase activating protein, putative | 492 | 1e-049 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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