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Information for unigene UN36097

FASTA Sequence
Unigene ID: UN36097Length: 683 SSR 
GGATCTCTAATTCTTACAGTTTCCTTCTCCTTCGTCTTCTTCTCAGTTTCCTTTCCTTTCACTCTTACGATCTTTGTTTTAAGTGT
TAACGTTATGTCTTCGGAAGCGGAGTTTGCAGAGTTTTCGGCTTTATTCGAGAGGATGATCAGACGGCCGGAGAGTCGTGATGATC
AGATCGGCTCTGGGGGAGTTCTTGAACGGCGACGAATTTTCGGAGAAACAAGGGAGGTCGCCGGCGTCGAAATCGTCGGTGGAGAG
TATGCCACGTGTCGTGATCGGGAAAGATGAGGAGAGAGCAGGAGGAGGAGGAGGATCGTGTCCGGTTTGCCTAGAGGAGTGGTCGG
AAGGTGACGTGGCGTCGGAGATGCCGTGTAAGCATAGGTTCCACTCGAAGTGTGTGGAGGAGTGGTTGGGGAGGCACGCCACGTGT
CCGTTGTGTAGGTACGAGATGCCTGTTGAAGAAGTGGAGGGAGAGAAGAAAGTTGGGGTTTGGATTGGGTTCGCTGTTGGTTCTGG
TGAGAGGAGAAGCGAAGGAGACGGGGGAAGAAGAAGCGATGGTGATTCGAACTCTCGAGATGGAACAGAGGCTTAGGTTTTAAGTG
TTTTAGGAAGAAACGTGTGTATATTCTTTTCGTTTTCTTTTTCGAATGTCTTTTCGAGTTTCAATAAAGATTGGTTGATGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892794 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]5206e-051
NP_172872 RING/U-box domain-containing protein [Arabidopsis thaliana]4642e-044
XP_002316133 predicted protein [Populus trichocarpa]2983e-025
ABK95155 unknown [Populus trichocarpa]2912e-024
ABK96350 unknown [Populus trichocarpa x Populus deltoides]2912e-024

Swiss-Prot top hits (Blast detail)Scoree value
Q6GPV5 E3 ubiquitin-protein ligase RNF1812093e-016
Q5M974 E3 ubiquitin-protein ligase RNF1812093e-016
Q9P0P0 E3 ubiquitin-protein ligase RNF1812022e-015
Q3T0W3 E3 ubiquitin-protein ligase RNF1812004e-015
Q6AXU4 E3 ubiquitin-protein ligase RNF1811978e-015

TrEMBL top hits (Blast detail)Scoree value
Q9XI67 At1g142004641e-044
A9PB64 Predicted protein2982e-025
A9PFK2 Putative uncharacterized protein2912e-024
A9PIZ7 Putative uncharacterized protein2912e-024
B9HI76 Predicted protein2912e-024

Arabidopsis top hits (Blast detail)Scoree value
AT1G14200.1 zinc finger (C3HC4-type RING finger) family protein4649e-047
AT1G26800.1 zinc finger (C3HC4-type RING finger) family protein2811e-025
AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein2004e-016
AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein2004e-016
AT5G08139.1 zinc finger (C3HC4-type RING finger) family protein1942e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information