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Information for unigene UN36207
| FASTA Sequence |
| Unigene ID: UN36207 | Length: 1004 |
SSR | | GGAGAGTCCTGCATTAGCATTTATTGACTGGAGCCAATTTAAAGCTTTTATATTTCTCGTGAACTTGAGCGGAGTTAAAAGCTCCT
TAAACGGTTACTTACTTCTCTGATTCTTTATTTTTATTGGTGTCCGACTCAAGATGAGTCAACTCGGTGATTTGCTCAGAGAATCG
GCGGACGAAACGGAGAGTGGGAGGACGATGATGCTGAGTTTACTCGAGGAAGCTCGAACCGACGGTGAAGATCGGCGACGAGCAAG
TGGAGTACGCTGAAACAACGGCTGAGATTCGACTGGGTTGGCTGTTGCGGTGGACCCACCTTGCTGCGTCTCAGAGGATCAGAAGC
GCCAATCGCCGAGGAAGACGAAGATGACGAGGAGGAGGAGGAGGAAAACTCGGGTCAAAACCGGGTCGTTGACTTGTCGAATTCGG
TTCCGGATCCGGGTTTAGTTGTGGAGACGGATTGTTTAACACGTGGCACAAGGAATCTCGCGGAGGCTCTTGCAGAGGAGAGACTA
GCGCGGGGCGAGCACGTGACGGAGGCTTCGGTTGCTAAGGTACCGTTGATGAAACTGCTGGCGGAAACGGAAGGTTGCGATGTGAC
CACGTGGACAGGTGCTGATCCTTTGTGTTGCGTGTGTATGGGAAGGGAGAAAGACGCGGCGTTTATCCCATGTGGGCATACGTATT
GTAGAGTGTGTTCAAGAGAGATTTGGATGAACCGTGGATCGTGTCCTCTTTGTAACCGTTCCATCGTTGACGTTCTTGATCTTTAC
TGAAAATTTACATTCATGGATTTGTTATGTTCCGATCGACGGTAAAGTTCACGTTCTGTGTGCATATTTCGATTGTAGTTTCAAAA
GAAGGATGATGTATTGGTGGGTCATAAACATTGTGGTAAGAAAATAATTTGTTTAGACAAATGGAATATTTATGTTACGTTGTGAA
GAATAATAGTTCACTTCACTCGAGTGTAAAGTAAATGATTATCGATCTTTTTTTTTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176427 RING/U-box domain-containing protein [Arabidopsis thaliana] | 657 | 2e-066 |
| XP_002888031 hypothetical protein ARALYDRAFT_893249 [Arabidopsis lyrata subsp. lyrata] | 633 | 1e-063 |
| NP_193956 RING/U-box domain-containing protein [Arabidopsis thaliana] | 377 | 5e-034 |
| CAA16775 hypothetical protein [Arabidopsis thaliana] | 377 | 5e-034 |
| XP_002518414 ubiquitin-protein ligase, putative [Ricinus communis] | 348 | 1e-030 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O48801 F2401.10 | 657 | 1e-066 |
| O49630 Putative uncharacterized protein AT4g22250 | 377 | 3e-034 |
| Q8GXD8 Putative uncharacterized protein At4g22250 | 377 | 3e-034 |
| B9RXE5 Ubiquitin-protein ligase, putative | 348 | 8e-031 |
| B9N8H0 Predicted protein | 313 | 9e-027 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G62370.1 zinc finger (C3HC4-type RING finger) family protein | 658 | 5e-069 |
| AT4G22250.1 zinc finger (C3HC4-type RING finger) family protein | 318 | 1e-029 |
| AT4G03965.1 protein binding / zinc ion binding | 263 | 3e-023 |
| AT3G25030.1 zinc finger (C3HC4-type RING finger) family protein | 235 | 5e-020 |
| AT3G25030.2 zinc finger (C3HC4-type RING finger) family protein | 235 | 5e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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