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Information for unigene UN36218

FASTA Sequence
Unigene ID: UN36218Length: 1125 SSR 
GGCAAAAGAAAATAGTCGGTCTTTAAAACTTTAACTAACAACAAAAGTGAAATATACATTAAAGTTCGCCTACATATTCCTTTATG
GCTGACATATTCAGTATTTTATCTTTAAGCTCCGAAATGTTGATTTTTGTTCCATTGCCGACCTGTGTTAGGAGGGAGAAAGCGAG
TACACTTGTTGTCAAGACAATCATCCTCAAGACTCCATCTTTAATCTTCGCATCCATCTCCTCTTCTTCTTCTTTCTCTGCGAGAT
CTCTCCCCCTCTCTCTCTCTCTCCAATACGAAATTAAACAGAGACCAGTACGGAGCAAGTAGAGCGTTACGAGGAGACAGTACAGT
TCATAGAGCTGAAAAACAATTGTGTGTATAAATCTCTGTTGCAGCCTAGTTGAGAGGCAGCTAACAACACTAAGCCTTTCTTCTTG
AGCCAAGATTTGAAGAACACTCGAGAGGCGAAACTGGTTTCGTTCGAGACAGCAACTTATGATGATCTCCATGCCGTGAAAACAAG
GCATGACAATAACCGTAATGTGTTTGTCATCTGCACATGAGCATCTCCGTGATGATGTCGACAATGATGATGATACACTACTAGTG
CATTCCTCTGTAGTTGGATGAGCCGTAACTGTGACCGGTATGGATTTATTTAACCGATTTTTCTTCTCGTTGAGTTCTTTGATCTT
GTTTTGCAAGTCTTTGATGTAGTTAACTGCTTGAAAAACGTGATCTGCTGACGAGCGCTTGCCCTGGATATATTGAAGTGGCAAAA
GAGATCTTAGGCTTTTGAAAAGAGATGAGACTTCTAATCTTCTTTGCCTTTCAATATCTCTGTGTCTCATCTTCTTGCTTTCTCGA
TCATCATCCCCTTTGTTGGCTTCACTTTCTCCATATGTATCACATACACTTCGTTTCTTCTTGCTTACACCATTTTTGTCGGCGAT
TGGGTTGCAAACATCATGGTTTTGGTATGATATCAACGGCGAAAGAAAAGAATCAGTAAACGGTAATCCATCTTCGTCAGTTAAAT
CAGGCATGAACAATGAAGTCACAAAGTCCATATTTTCTTGGTGAAAATGAAATCTTAGAATTTTTAGATGCTTTTGATTTTATTTT
TGTCGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887989 hypothetical protein ARALYDRAFT_475056 [Arabidopsis lyrata subsp. lyrata]8651e-090
NP_683462 transcription factor bHLH125 [Arabidopsis thaliana]8321e-086
NP_172715 basic helix-loop-helix domain-containing protein [Arabidopsis thaliana]3401e-029
AAF88076 T12C24.8 [Arabidopsis thaliana]3401e-029
XP_002889939 hypothetical protein ARALYDRAFT_471403 [Arabidopsis lyrata subsp. lyrata]2996e-025

Swiss-Prot top hits (Blast detail)Scoree value
Q9LQ08 Transcription factor bHLH1258324e-088
Q9LN95 Transcription factor bHLH555323e-053
Q9STJ6 Transcription factor bHLH1262322e-018
Q9FLI0 Transcription factor bHLH1202151e-016
Q9FLI1 Transcription factor bHLH362043e-015

TrEMBL top hits (Blast detail)Scoree value
C0SV13 Putative uncharacterized protein At1g62975 (Fragment)8327e-087
B9ICZ3 Predicted protein2547e-020
B9GKR8 Predicted protein2377e-018
B9I4H5 Predicted protein2287e-017
A5BEQ1 Putative uncharacterized protein2271e-016

Arabidopsis top hits (Blast detail)Scoree value
AT1G62975.1 basic helix-loop-helix (bHLH) family protein (bHLH125)8324e-089
AT1G12540.1 basic helix-loop-helix (bHLH) family protein4741e-047
AT4G25410.1 DNA binding / transcription factor2321e-019
AT5G51780.1 basix helix-loop-helix (bHLH) family protein2042e-016
AT5G51790.1 basix helix-loop-helix (bHLH) family protein2016e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  50%
 
71  50%

Unigene MembersMember information