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Information for unigene UN36220
| FASTA Sequence |
| Unigene ID: UN36220 | Length: 1079 |
SSR | | CGATCGAGGCTAGGCTAGGTGGAGATAGAGATGGCCGGAGCTAATGATGATGATGATGATCGTAACAACCAATCGACGGCACATGT
CCGTGGAAAACGCGGGAACAAGGAGGAGGAGGATTCTTCTACTCTTGTTGAAATCTCGTGCTCGATATGCCTCGAGTTGGTGATCG
ACGACGGTTCCAGATCCATGGCTAAGCTCCAATGTGGTCACCAATTCCATTTGGACTGCATTGGATCCGCTTTCAACATGAAAGGA
ACCATGCAATGCCCTAACTGTCGTAATGTTGAAAAGGGTCAGTGGCTCTTTGCCAATGCTTCTTCTACTCGTCTCTTTCCTGAGTT
TGTCATGGGAGATTGGATCCCTGATGAAGATTTGTATGCTTTAAGCTATCCTGAAATGCAATATCGGGTCCATTGGTGCCCCTTTG
GTGAGCTCTCTCAAGCTGCTTCATTCGAGGAACTGGAACCTTCAGCCACTACATATCATAATGAGTTCCATGGGCCCCATGCCATT
GCTATGAACCATTCATATCCTGCATACGTTGCACCAGGCCCAGCCTCCACTCCAAGAACTAGGGATAACAGCAATAACGCAGATGA
CCATCCCTGGAACAGCCACTCTACTGACCATTTTCACCAGCTCTCTGTTGCTCCCCACTATCACCATCACCATCATCATCATTCTA
CATCGTTTTCTCTTCCACGTGCTCATGTAGTTGATGGTGAAATCGACTCTTCAGCAGCACGGGGCATTTCTCATCCACACCCATTT
CTCTTTAGTTATCGGTCTAGTCCAAGAACCTCACCAGCAGCTAACACTCAACAAGGAAGCAGCAGCAGCGCCGTGCAAATGCGTGA
ACACCTTCACACGCAGCAGCATCATGTTTATAGTAATCAGAGGCAACATCATGTTAATGGTCCCAATCTCGCATCACCTCTGGTCT
CTGTGACAAGAAGGGGATTACAGCCACTACCAACCCCAGATCAGAACGTTGGATTCTTCATTTATCCACCACCACAAGCACCGAGC
ACCTCACGTGAACGAGAAAGCGATCAGTTTCATCCTTGGGAGAGAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882128 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 1280 | 1e-138 |
| NP_850478 RING/U-box domain-containing protein [Arabidopsis thaliana] | 1248 | 5e-135 |
| XP_002523069 DNA binding protein, putative [Ricinus communis] | 552 | 3e-054 |
| XP_002268579 PREDICTED: hypothetical protein [Vitis vinifera] | 506 | 6e-049 |
| CBI36857 unnamed protein product [Vitis vinifera] | 506 | 6e-049 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O82239 At2g47700 | 1248 | 4e-135 |
| B9SAQ0 DNA binding protein, putative | 552 | 2e-054 |
| B9N4J3 Predicted protein | 463 | 4e-044 |
| B9I7H8 Predicted protein (Fragment) | 461 | 7e-044 |
| B9RFB9 DNA binding protein, putative | 459 | 1e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47700.1 zinc finger (C3HC4-type RING finger) family protein | 1248 | 2e-137 |
| AT3G05545.1 transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein | 409 | 4e-040 |
| AT2G15260.1 zinc finger (C3HC4-type RING finger) family protein | 223 | 1e-018 |
| AT4G13490.1 zinc finger (C3HC4-type RING finger) family protein | 201 | 5e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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