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Information for unigene UN36229

FASTA Sequence
Unigene ID: UN36229Length: 991 SSR 
GGGCCAGCTTCCGACACACACACTCTCTCTCTCTCTCTATCTCTATCTTCAGAGGAGATTCGAAATGCAAGAGCAAGCGACAAGCT
CTTTAGCTGCAAGCTCTCTACCATCAAGCAGCGAGAGATCATCAAGCTCTAATCCACATTTGGAGATCAAAGAAGGACTTGAAAGC
GATGAGGAGATACGGAGAGTGCCGGAGTTTGCAAAAGAAACCTCTGGATCAGCGAACGGCCAGGACAGGGCACAGACAGCTGTCGG
AGAACGTCAAAGGAAGCGAGGGAGGACTCCGGCGGAGAAAGAGACCAAGCGGCTAAAGAGGTTGTTGAGGAATAGAGTATCAGCGC
AGCAAGCAAGAGAGAGGAAGAAAGCTTACTTGGGTGAGTTGGAGAATAGAGTGAAAGACTTGGAGACAAAAACTTTGAGCTTGATG
AGAGACTCTTTACTTTGCAGAACGAGAACCAGATGCTTAGACAGGTATGAATTCGTTTTTTTTATCTTTATCCTGTAAACCTTGAT
CATAATCTGCCAATGTTAATGATTGCTCCATTAATTTGCAAAGCCTTGAGACCTATTCATCAAATAGATTAGTAAACTAAAAGACT
AATAAGGAGCTAGTTCACAAGATTCTTTAATGGTTCTTGGAATGTTCATTCACTGTGGTCTATGTGGAAGCTTTGGTTCTTTGTTA
TGTTATTTCTGTGGATTTTCTGTTAAGTTTTGGGTGAATGCAGATTCTGAAGAACACAACAGGAAACAAGAGAGGAGGCGGTGGTT
CTAACGCTGCTGCAAGCCTTTGATCTCTCCCCACTTGTTCTTTTCCTATTTTATGTGGATAAAATTTACAGGGAAATTGTATTAAT
AAAATTATTGTTACAATTTCTATATTGCATGGGGGTGTGACTTGTGTGATATATAGAGTATCTTGTAATCTTTAGATATTTATTTT
CTTAATTCAAAAGTGTGCAACTGTCATTTGGCAGTTTGCTAGAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABY83460 elongated hypocotyl 5 protein [Brassica rapa subsp. rapa]4724e-045
Q9SM50 RecName: Full=Transcription factor HY5; AltName: Full=LeHY5; AltName: Full=tHY53982e-036
ADG58017 transcription factor [Lycoris longituba]3542e-031
AAO22523 HY5 [Brassica rapa subsp. pekinensis]3382e-029
XP_002873502 hypothetical protein ARALYDRAFT_909087 [Arabidopsis lyrata subsp. lyrata]3013e-025

Swiss-Prot top hits (Blast detail)Scoree value
Q9SM50 Transcription factor HY53988e-038
O24646 Transcription factor HY52903e-025
Q8W191 Transcription factor HY5-like1782e-012
Q3SZZ2 X-box-binding protein 11398e-008
Q8TFF3 Transcriptional activator hac11343e-007

TrEMBL top hits (Blast detail)Scoree value
B0LX70 Elongated hypocotyl 5 protein4723e-045
D6MKH0 Transcription factor3541e-031
Q84XX8 HY5 (Fragment)3381e-029
Q1H5E5 At5g112602904e-024
A9NTI7 Putative uncharacterized protein2511e-019

Arabidopsis top hits (Blast detail)Scoree value
AT5G11260.1 HY5 (ELONGATED HYPOCOTYL 5); DNA binding / double-stranded DNA binding / transcription factor2902e-026
AT3G17609.1 HYH (HY5-HOMOLOG); DNA binding / transcription factor1782e-013
AT3G17609.2 HYH (HY5-HOMOLOG); DNA binding / transcription factor1782e-013
AT3G17609.3 HYH (HY5-HOMOLOG); DNA binding / transcription factor1782e-013
AT3G17609.4 HYH (HY5-HOMOLOG); DNA binding / transcription factor1782e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information