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Information for unigene UN36348
| FASTA Sequence |
| Unigene ID: UN36348 | Length: 661 |
SSR | | GGAACTATGACTATTCATGATTCCATAATTGAATCAATTACACAAACTAAAGGAATGTTATGGTAAAACTTCGTTTAAAACGATGT
GGTAGAAAGCAACGAGCCGTTTATCGAATCGTTGCAATTGATGTTCGATCCCGAAGAGAAGGAAGAGATCTTCGGAAGGTGGGGTT
TTATGATCCGATAACTAATCAAACTTATTTAAATCTTCCTGCTATTCTCGATTTCCTTAAAAAGGGCTTAGAAAGAAGTCTTGGCC
TCAGACATGGGAAGGAGTCCAGCTCTTGTTTGCAGGCATTGACATCAAACTAGCAACAAGGGTTTTTAGGATGGGGAAAATCAGTA
AAGAGCAGCTGCTATGGTGTGAAGAGAAGATGAAGAAACTCAACTTTTCTGCTGGGAAGCTTCAAAGACACCCATCTCCAGTTCTT
TTCCCTTCTTGTTGATAATAATAATAATAATAATGATGTTAACACCATTTTGAAGTAATTTGTGTTGTCAACATTAGCTTAATTAT
CTCTGCATTAGATGTTCCAAATCCAATAACAGTTTGCTTTTTTTTTTTTTCTCCGGTCATTAGATTTTAGTATTAAGGGACCATTT
TCTCATGTGTTGTCGTGTGGATGTAAAGCACATATGAAAGAATCCAATGTTTGTCTTGC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_188661 uncharacterized protein [Arabidopsis thaliana] | 343 | 2e-030 |
| XP_002885360 hypothetical protein ARALYDRAFT_479545 [Arabidopsis lyrata subsp. lyrata] | 340 | 4e-030 |
| BAJ54085 ribosomal protein S16 [Brassica oleracea] | 316 | 3e-027 |
| P10359 RecName: Full=30S ribosomal protein S16, chloroplastic | 307 | 3e-026 |
| YP_001123619 ribosomal protein S16 [Lepidium virginicum] | 307 | 3e-026 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P10359 30S ribosomal protein S16, chloroplastic | 307 | 1e-027 |
| Q2L8Y7 30S ribosomal protein S16, chloroplastic | 288 | 2e-025 |
| Q589B0 30S ribosomal protein S16, chloroplastic | 288 | 2e-025 |
| Q332Z6 30S ribosomal protein S16, chloroplastic | 285 | 5e-025 |
| P28807 30S ribosomal protein S16, chloroplastic | 285 | 5e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L795 Putative uncharacterized protein At3g20260 | 343 | 1e-030 |
| A4QL88 Ribosomal protein S16 | 307 | 2e-026 |
| D1L8M0 Ribosomal protein S16 | 306 | 3e-026 |
| A4QK87 Ribosomal protein S16 | 302 | 7e-026 |
| A4QLR5 Ribosomal protein S16 | 302 | 7e-026 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G20260.1 structural constituent of ribosome | 343 | 9e-033 |
| ATCG00050.1 Homologous to the bacterial ribosomal protein S16 | 280 | 2e-025 |
| AT1G73850.1 structural constituent of ribosome | 126 | 1e-007 |
| AT4G34620.1 SSR16 (SMALL SUBUNIT RIBOSOMAL PROTEIN 16); structural constituent of ribosome | 117 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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