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Information for unigene UN36374

FASTA Sequence
Unigene ID: UN36374Length: 1015 SSR 
GGCACGTCATCATCCACAACGTCCACATCTACGACTGCAAACCCTCCGGCGGCGCCGTCATCGCCGCGACTCCGACTAAGTCCGGT
CGGCGAGGCAGGTCCGACGGCGACGGGATCTCCATCTTCGGGTCCCAGAAGATCTGGATCGACCACTGCTCCATGAGCCACTGCAC
CGACGGGCTCATCGACGCGGTGATGGGGTCCACCGCGATCACGATATCGAACAACTACTTCGCGCACCACGACGAGGTGATGCTGT
TGGGTCATGACGACAGTTACGGTCCGGACACGGGGATGCAGGTGACGATCGCGTTTAATCATTTCGGACAGGGGCTTGTTCAGAGG
ATGCCGAGGTGTCGGAGAGGGTATATACACGTGGTGAATAATGATTTTACTTCGTGGAAGATGTATGCGATTGGTGGTAGTGGTAA
TCCCACGATTAATAGTCAAGGGAATCGTTACATTGCTCCTTCTGATCCTAGCGCCAAAGAGGTGACGAAGCGGGTGGATTCAAAGG
ACGATGGAGAGTGGTCGAATTGGAATTGGAGAACGGAAGGAGATCTGATGGAGAACGGAGCTTTCTTTGTGGCGTCTGGTGGAGGA
GTGAGCGCATTGTACTCTAAAGCTTCCAGTGTGGAGCCTAAAGCTTCCGCTCTTGTAGACCAACTCACTCGAAACGCTGGCGTTTT
TGGCGGTCCCAGGGATGATCAAGGTCAGAGTGGCGATTCTTATTCTGGTTATGGAGGTGGAGGTGGTGGTGTTGGTGGTGGTGGTG
GTGAAGGCGGAAGCAGCGGCAGCAATGGAGGAACCAGTGCTATTGGCGGAACAACGAGAGGATGTAGTACCGGCAGCAGCGATGAC
AACAATGTCTTCGGGATGATCTTCGGAAGCAATGCACCGCCTCGACCACGTTTAACGTGTGTGTTTTCTTTGATAATGATTTGTGT
TTTGTCATTATCAACTCTATTATTGTTGTAGTCCGCAAGGATAACTAATAGGATTTGGACCCTTCAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAQ87025 pectate lyase-like protein [Brassica napus]16572e-182
NP_191052 putative pectate lyase 13 [Arabidopsis thaliana]13363e-145
XP_002876277 hypothetical protein ARALYDRAFT_485907 [Arabidopsis lyrata subsp. lyrata]11633e-125
CAB41092 pectate lyase-like protein [Arabidopsis thaliana]11454e-123
ABD47739 pectate lyase [Eucalyptus globulus subsp. globulus]10471e-111

Swiss-Prot top hits (Blast detail)Scoree value
Q93Z04 Probable pectate lyase 1313361e-146
Q9SCP2 Probable pectate lyase 128971e-095
Q944R1 Probable pectate lyase 158432e-089
Q940Q1 Probable pectate lyase 18252e-087
Q93WF1 Probable pectate lyase 208182e-086

TrEMBL top hits (Blast detail)Scoree value
Q6U6I9 Pectate lyase-like protein16571e-182
Q27U75 Pectate lyase (Fragment)10477e-112
B9T6Z7 Pectate lyase, putative10333e-110
B9HUL2 Predicted protein10163e-108
B8BH93 Putative uncharacterized protein10064e-107

Arabidopsis top hits (Blast detail)Scoree value
AT3G54920.1 PMR6 (powdery mildew resistant 6); lyase/ pectate lyase13574e-150
AT5G04310.1 pectate lyase family protein10044e-109
AT3G53190.1 pectate lyase family protein8971e-096
AT4G13710.1 pectate lyase family protein8432e-090
AT1G04680.1 pectate lyase family protein8262e-088

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information