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Information for unigene UN36469
| FASTA Sequence |
| Unigene ID: UN36469 | Length: 842 |
SSR | | GCCATCTGGTGGTCTTGTTCAGAAGGAAGAGAGCTTCCCTGAGAGACCCGGTGAACCAGAGTGCCAGTACTATTTGAAAACAGGAG
ATTGTAAGTTTGGTACATCTTGCAAGTTTCATCATCCTCGACTTCGTGTTCCACCTACACCTAATTGCGTCCTCAGCTCCATTGGT
CTTCATCTACGTCCGGGTGTGCAATGTCGCACTTTCTACGTACAAAACGGCTTCTGTAAGTTTGGATCAACATGTAAATTTGATCA
TCCTGTGGGAGTCATCAGATACAATCCTTCTGCATCCTCCCTCGCTGATGCACCCGTGGCTCCTTTCCCTCTCTTGGCCTCTTCTT
CTTCGTCTGCTGCTGAGCTCATTTCAGGGGATGATCCTTACTTGTCAACCTCAAGAAGCGCATCTAACAACATTTCAGCCGGTTTG
ATATTCTCCCAGAGTGGCGTTTCAGTTCCATTCAATGACCTCCAGCTCTCCACCCAGACCTTTTTTTCCCTAACCGGTACCAGAAT
CACAAGACAAGGCCGAGAAATCCGTCGATCCTTTTAAAAAATAAAGGGTAAGCATATACGCAGGCCTCAGGATCATTCTTAATATT
ATATCATATATATATATAGAAGCATGTGATGTGAGATATTATAATCTCCCTACCCTAAACCCTACCTAAAAAAGAACAAGTCTAGT
TGAGTAGAAGAACCGATTGAGAATCGAATCACATATACCTAAGAGGAAATGTATATGTGCATATATATAAAAAAAAAAAACAAGAA
AAGGCCCTTTCTTTCTTATGTGTTGTGTGTGTATGTGTGTGTAAGGTTTCTATAGTGAGGTTTCTCTC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002880326 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 729 | 5e-075 |
| NP_182306 zinc finger CCCH domain-containing protein 32 [Arabidopsis thaliana] | 718 | 1e-073 |
| AAC63639 unknown protein [Arabidopsis thaliana] | 718 | 1e-073 |
| NP_001078077 zinc finger CCCH domain-containing protein 32 [Arabidopsis thaliana] | 718 | 1e-073 |
| XP_002520668 nucleic acid binding protein, putative [Ricinus communis] | 577 | 2e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84W91 Zinc finger CCCH domain-containing protein 32 | 718 | 5e-075 |
| Q5NAV3 Zinc finger CCCH domain-containing protein 5 | 410 | 2e-039 |
| Q9SQU4 Zinc finger CCCH domain-containing protein 34 | 376 | 2e-035 |
| Q5NAW2 Zinc finger CCCH domain-containing protein 6 | 374 | 4e-035 |
| Q6NPN3 Zinc finger CCCH domain-containing protein 58 | 368 | 2e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MR17 Uncharacterized protein At2g47850.2 | 718 | 7e-074 |
| B9S3U9 Nucleic acid binding protein, putative | 577 | 2e-057 |
| A5B3A4 Putative uncharacterized protein | 453 | 4e-043 |
| B9RT23 Nucleic acid binding protein, putative | 438 | 2e-041 |
| B9EV16 Putative uncharacterized protein | 410 | 4e-038 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47850.1 zinc finger (CCCH-type) family protein | 719 | 3e-076 |
| AT2G47850.2 zinc finger (CCCH-type) family protein | 719 | 3e-076 |
| AT2G47850.3 zinc finger (CCCH-type) family protein | 719 | 3e-076 |
| AT3G06410.1 nucleic acid binding / zinc ion binding | 376 | 2e-036 |
| AT5G18550.1 nucleic acid binding / zinc ion binding | 368 | 2e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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